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Aldh16a1
Gene Detail
 Symbol
Name
ID
Aldh16a1
aldehyde dehydrogenase 16 family, member A1
MGI:1916998
Synonyms 2410004H02Rik
Feature Type protein coding gene
Genetic Map
Chromosome 7
29.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:45140684-45154584 bp, - strand
From VEGA annotation of GRCm38

  13901 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:34938  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: aldehyde dehydrogenase with duplicated domain
Gene Tree: Aldh16a1

Human
homologs
Human Homolog ALDH16A1, aldehyde dehydrogenase 16 family, member A1
NCBI Gene ID 126133
neXtProt AC  NX_Q8IZ83
Human Chr (Location)  19q13.33; chr19:49453216-49471048 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(24) : Gene trapped(22) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Aldh16a1 interacts with 125 markers (Mir1a-1, Mir1a-2, Mir24-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process metabolic process, oxidation-reduction process
Component extracellular vesicular exosome, membrane
Function oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(15)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000023570 (Evidence)
Ensembl Gene ModelENSMUSG00000007833 (Evidence)
Entrez Gene69748 (Evidence)
DFCITC1572960
DoTSDT.101398624, DT.101739577, DT.40180454, DT.55191632, DT.97380546, DT.97399172
NIA Mouse Gene IndexU028518
Consensus CDS ProjectCCDS21231.1
International Mouse Knockout Project StatusAldh16a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023570 VEGA Gene Model | MGI Sequence Detail 13901 C57BL/6J ±  kb
transcript OTTMUST00000057508 VEGA | MGI Sequence Detail 3537 Not Applicable 
polypeptide OTTMUSP00000027745 VEGA | MGI Sequence Detail 802 Not Applicable 

For the selected sequences
All sequences(69) RefSeq(4) UniProt(5)
Polymorphisms SNPs within 2kb(131 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011408 Aldehyde dehydrogenase
InterPro IPR016163 Aldehyde dehydrogenase, C-terminal
InterPro IPR015590 Aldehyde dehydrogenase domain
InterPro IPR016162 Aldehyde dehydrogenase, N-terminal
InterPro IPR016161 Aldehyde/histidinol dehydrogenase
Protein Ontology PR:000031280 aldehyde dehydrogenase family 16 member A1
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2141972

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory