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Atp23 Gene Detail
Summary
  • Symbol
    Atp23
  • Name
    ATP23 metallopeptidase and ATP synthase assembly factor homolog
  • Synonyms
    1110068E08Rik, 2410012H02Rik, Xrcc6bp1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916984
    NCBI Gene: 68876
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:126868427-126901355 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 73.84 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    301 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916984
protein coding gene Chr10:126868427-126901715 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017796
protein coding gene Chr10:130425696-130460126 (-)
A/J MGP_AJ_G0017771
protein coding gene Chr10:125210338-125241013 (-)
AKR/J MGP_AKRJ_G0017734
protein coding gene Chr10:128911267-128947916 (-)
BALB/cJ MGP_BALBcJ_G0017735
protein coding gene Chr10:125615749-125644335 (-)
C3H/HeJ MGP_C3HHeJ_G0017559
protein coding gene Chr10:129043290-129079677 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018190
protein coding gene Chr10:134835031-134883236 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015870
protein coding gene Chr10:119242173-119269103 (-)
CAST/EiJ MGP_CASTEiJ_G0017119
protein coding gene Chr10:129688346-129715583 (-)
CBA/J MGP_CBAJ_G0017528
protein coding gene Chr10:140258601-140293782 (-)
DBA/2J MGP_DBA2J_G0017634
protein coding gene Chr10:124298764-124326585 (-)
FVB/NJ MGP_FVBNJ_G0017629
protein coding gene Chr10:123244316-123278997 (-)
LP/J MGP_LPJ_G0017708
protein coding gene Chr10:130985827-131025696 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017657
protein coding gene Chr10:142998335-143032908 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018230
protein coding gene Chr10:128969064-129004875 (-)
PWK/PhJ MGP_PWKPhJ_G0016904
protein coding gene Chr10:124481991-124517180 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016696
protein coding gene Chr10:127992996-128022611 (-)
WSB/EiJ MGP_WSBEiJ_G0017180
protein coding gene Chr10:129182177-129215051 (-)



Homology
more
  • Human Ortholog
    ATP23, ATP23 metallopeptidase and ATP synthase assembly factor homolog
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATP23, ATP23 metallopeptidase and ATP synthase assembly factor homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KUB3, XRCC6BP1
  • Links
    NCBI Gene ID: 91419
    neXtProt AC: NX_Q9Y6H3
    UniProt: Q9Y6H3

  • Chr Location
    12q14.1; chr12:57941504-57957269 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41699
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ATP23
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025436 Ensembl Gene Model | MGI Sequence Detail 32929 C57BL/6J ±  kb
transcript ENSMUST00000168520 Ensembl | MGI Sequence Detail 1043 Not Applicable  
polypeptide ENSMUSP00000128382 Ensembl | MGI Sequence Detail 246 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 4
Other
Accession IDs
less
MGI:1916126
References
more
  • Summaries
    All 25
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory