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Aarsd1 Gene Detail
Summary
  • Symbol
    Aarsd1
  • Name
    alanyl-tRNA synthetase domain containing 1
  • Synonyms
    2310044P18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916934
    NCBI Gene: 69684
Location & Maps
more
  • Sequence Map
    Chr11:101406839-101417615 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10777 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 64.95 cM, cytoband D
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    AARSD1, alanyl-tRNA synthetase domain containing 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    AARSD1, alanyl-tRNA synthetase domain containing 1
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 80755
    neXtProt AC: NX_Q9BTE6

  • Chr Location
    17q21.31; chr17:42950526-42964498 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
  • Genomic Mutations
    1 involving Aarsd1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030988 VEGA Gene Model | MGI Sequence Detail 10777 C57BL/6J ±  kb
transcript OTTMUST00000005665 VEGA | MGI Sequence Detail 1516 Not Applicable  
polypeptide OTTMUSP00000002707 VEGA | MGI Sequence Detail 412 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    37 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR018165 Alanyl-tRNA synthetase, class IIc, core domain
    IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
    IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
    IPR012947 Threonyl/alanyl tRNA synthetase, SAD
    IPR009000 Translation protein, beta-barrel domain
Molecular
Reagents
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  • All nucleic 92
    cDNA 92

    Microarray probesets 2
Other
Accession IDs
less
MGI:2144034
References
more
  • Summaries
    All 27
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:169218 Nawaz MH, et al., p23H implicated as cis/trans regulator of AlaXp-directed editing for mammalian cell homeostasis. Proc Natl Acad Sci U S A. 2011 Feb 15;108(7):2723-8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory