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Tmem52 Gene Detail
Summary
  • Symbol
    Tmem52
  • Name
    transmembrane protein 52
  • Synonyms
    2310043I08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916921
    NCBI Gene: 69671
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155469114-155470858 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 86.17 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916921
protein coding gene Chr4:155469114-155470858 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029214
protein coding gene Chr4:159801867-159803611 (+)
A/J MGP_AJ_G0029179
protein coding gene Chr4:153088495-153090239 (+)
AKR/J MGP_AKRJ_G0029127
protein coding gene Chr4:157248123-157249867 (+)
BALB/cJ MGP_BALBcJ_G0029195
protein coding gene Chr4:153558149-153559893 (+)
C3H/HeJ MGP_C3HHeJ_G0028916
protein coding gene Chr4:157794141-157795885 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029644
protein coding gene Chr4:165490533-165492277 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026890
protein coding gene Chr4:145379863-145381610 (+)
CAST/EiJ MGP_CASTEiJ_G0028329
protein coding gene Chr4:155230575-155232318 (+)
CBA/J MGP_CBAJ_G0028878
protein coding gene Chr4:170478114-170479858 (+)
DBA/2J MGP_DBA2J_G0029027
protein coding gene Chr4:153107936-153109680 (+)
FVB/NJ MGP_FVBNJ_G0028991
protein coding gene Chr4:152347332-152349076 (+)
LP/J MGP_LPJ_G0029117
protein coding gene Chr4:159725089-159726833 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029018
protein coding gene Chr4:173307018-173308762 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029676
protein coding gene Chr4:157866865-157868609 (+)
PWK/PhJ MGP_PWKPhJ_G0028049
protein coding gene Chr4:149242318-149244062 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027883
protein coding gene Chr4:152129166-152130928 (+)
WSB/EiJ MGP_WSBEiJ_G0028409
protein coding gene Chr4:158040444-158042188 (+)



Homology
more
  • Human Ortholog
    TMEM52, transmembrane protein 52
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TMEM52, transmembrane protein 52
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 339456
    neXtProt AC: NX_Q8NDY8
    UniProt: Q8NDY8

  • Chr Location
    1p36.33; chr1:1917590-1919301 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69671 NCBI Gene Model | MGI Sequence Detail 1745 C57BL/6J ±  kb
transcript NM_027161 RefSeq | MGI Sequence Detail 968 C57BL/6  
polypeptide Q9D702 UniProt | EBI | MGI Sequence Detail 196 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR038942 Transmembrane protein 52
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 5
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory