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Tmem52 Gene Detail
Summary
  • Symbol
    Tmem52
  • Name
    transmembrane protein 52
  • Synonyms
    2310043I08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916921
    NCBI Gene: 69671
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155553571-155555315 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 86.17 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916921
 protein coding gene Chr4:155553571-155555315 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029214
 protein coding gene Chr4:159801867-159803611 (+)
A/J MGP_AJ_G0029179
 protein coding gene Chr4:153088495-153090239 (+)
AKR/J MGP_AKRJ_G0029127
 protein coding gene Chr4:157248123-157249867 (+)
BALB/cJ MGP_BALBcJ_G0029195
 protein coding gene Chr4:153558149-153559893 (+)
C3H/HeJ MGP_C3HHeJ_G0028916
 protein coding gene Chr4:157794141-157795885 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029644
 protein coding gene Chr4:165490533-165492277 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026890
 protein coding gene Chr4:145379863-145381610 (+)
CAST/EiJ MGP_CASTEiJ_G0028329
 protein coding gene Chr4:155230575-155232318 (+)
CBA/J MGP_CBAJ_G0028878
 protein coding gene Chr4:170478114-170479858 (+)
DBA/2J MGP_DBA2J_G0029027
 protein coding gene Chr4:153107936-153109680 (+)
FVB/NJ MGP_FVBNJ_G0028991
 protein coding gene Chr4:152347332-152349076 (+)
LP/J MGP_LPJ_G0029117
 protein coding gene Chr4:159725089-159726833 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029018
 protein coding gene Chr4:173307018-173308762 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029676
 protein coding gene Chr4:157866865-157868609 (+)
PWK/PhJ MGP_PWKPhJ_G0028049
 protein coding gene Chr4:149242318-149244062 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027883
 protein coding gene Chr4:152129166-152130928 (+)
WSB/EiJ MGP_WSBEiJ_G0028409
 protein coding gene Chr4:158040444-158042188 (+)



Homology
more
  • Human Ortholog
    TMEM52, transmembrane protein 52
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM52, transmembrane protein 52
  • Links
    NCBI Gene ID: 339456
    neXtProt AC: NX_Q8NDY8
    UniProt: Q8NDY8

  • Chr Location
    1p36.33; chr1:1917590-1919279 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    18
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69671 NCBI Gene Model | MGI Sequence Detail 1745 C57BL/6J ±  kb
transcript NM_027161 RefSeq | MGI Sequence Detail 968 C57BL/6  
polypeptide Q9D702 UniProt | EBI | MGI Sequence Detail 196 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 5
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory