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Upk3bl Gene Detail
Summary
  • Symbol
    Upk3bl
  • Name
    uroplakin 3B-like
  • Synonyms
    2310043J07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916915
    NCBI Gene: 69665
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:136054492-136064326 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 75.72 cM, cytoband G1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    131 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916915
protein coding gene Chr5:136054492-136076695 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030198
protein coding gene Chr5:140668046-140679188 (+)
A/J MGP_AJ_G0030166
protein coding gene Chr5:134617615-134627441 (+)
AKR/J MGP_AKRJ_G0030099
protein coding gene Chr5:138970087-138980084 (+)
BALB/cJ MGP_BALBcJ_G0030176
protein coding gene Chr5:135973291-135983721 (+)
C3H/HeJ MGP_C3HHeJ_G0029892
protein coding gene Chr5:139584297-139594062 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030629
protein coding gene Chr5:145898199-145908950 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027849
protein coding gene Chr5:128906089-128916187 (+)
CAST/EiJ MGP_CASTEiJ_G0029302
protein coding gene Chr5:138981407-138991151 (+)
CBA/J MGP_CBAJ_G0029862
protein coding gene Chr5:151590455-151603599 (+)
DBA/2J MGP_DBA2J_G0030013
protein coding gene Chr5:134519145-134529078 (+)
FVB/NJ MGP_FVBNJ_G0029968
protein coding gene Chr5:133672474-133682274 (+)
LP/J MGP_LPJ_G0030102
protein coding gene Chr5:141094675-141106779 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030000
protein coding gene Chr5:154577840-154589574 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030669
protein coding gene Chr5:138778349-138789514 (+)
PWK/PhJ MGP_PWKPhJ_G0029015
protein coding gene Chr5:133580795-133590813 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028851
protein coding gene Chr5:136320502-136329920 (+)
WSB/EiJ MGP_WSBEiJ_G0029375
protein coding gene Chr5:139503836-139514922 (+)



Homology
more
  • Human Ortholog
    UPK3BL1, uroplakin 3B like 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    UPK3BL1, uroplakin 3B like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    UPK3BL, UPLP
  • Links
    NCBI Gene ID: 100134938
    neXtProt AC: NX_B0FP48, NX_E5RIL1
    UniProt: B0FP48

  • Chr Location
    chr7:102637025-102642791 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000006143 Ensembl Gene Model | MGI Sequence Detail 9835 C57BL/6J ±  kb
transcript ENSMUST00000111137 Ensembl | MGI Sequence Detail 1119 Not Applicable  
polypeptide ENSMUSP00000106767 Ensembl | MGI Sequence Detail 314 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory