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Cd164l2 Gene Detail
Summary
  • Symbol
    Cd164l2
  • Name
    CD164 sialomucin-like 2
  • Synonyms
    2310047N01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916905
    NCBI Gene: 69655
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:133220809-133224554 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 66.24 cM, cytoband D3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916905
protein coding gene Chr4:133212131-133224555 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028888
protein coding gene Chr4:135447021-135457336 (+)
A/J MGP_AJ_G0028847
protein coding gene Chr4:129781358-129793859 (+)
AKR/J MGP_AKRJ_G0028800
protein coding gene Chr4:133461385-133474229 (+)
BALB/cJ MGP_BALBcJ_G0028870
protein coding gene Chr4:130401418-130413918 (+)
C3H/HeJ MGP_C3HHeJ_G0028584
protein coding gene Chr4:133710866-133723674 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029312
protein coding gene Chr4:140317492-140329904 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026583
protein coding gene Chr4:122858869-122872366 (+)
CAST/EiJ MGP_CASTEiJ_G0028017
protein coding gene Chr4:131823971-131836165 (+)
CBA/J MGP_CBAJ_G0028550
protein coding gene Chr4:143971845-143984415 (+)
DBA/2J MGP_DBA2J_G0028699
protein coding gene Chr4:130200648-130213151 (+)
FVB/NJ MGP_FVBNJ_G0028666
protein coding gene Chr4:129073765-129086247 (+)
LP/J MGP_LPJ_G0028800
protein coding gene Chr4:135574997-135585309 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028692
protein coding gene Chr4:148498007-148510499 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029350
protein coding gene Chr4:133883021-133895550 (+)
PWK/PhJ MGP_PWKPhJ_G0027738
protein coding gene Chr4:126906374-126919487 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027564
protein coding gene Chr4:129723678-129737848 (+)
WSB/EiJ MGP_WSBEiJ_G0028097
protein coding gene Chr4:134048598-134063077 (+)



Homology
more
  • Human Ortholog
    CD164L2, CD164 molecule like 2
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CD164L2, CD164 molecule like 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    EAPG6122, UNQ6122
  • Links
    NCBI Gene ID: 388611
    neXtProt AC: NX_Q6UWJ8
    UniProt: Q6UWJ8

  • Chr Location
    1p36.11; chr1:27379100-27383333 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Cd164l2
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69655 NCBI Gene Model | MGI Sequence Detail 3746 C57BL/6J ±  kb
transcript NM_027152 RefSeq | MGI Sequence Detail 986 C57BL/6  
polypeptide Q9D6W7 UniProt | EBI | MGI Sequence Detail 172 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 19

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory