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Wdr20 Gene Detail
Summary
  • Symbol
    Wdr20
  • Name
    WD repeat domain 20
  • Synonyms
    2310040A13Rik, Wdr20a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916891
    NCBI Gene: 69641
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:110737944-110804238 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 60.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    326 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916891
protein coding gene Chr12:110737229-110804275 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020121
protein coding gene Chr12:113058477-113139462 (+)
A/J MGP_AJ_G0020075
protein coding gene Chr12:108725974-108793744 (+)
AKR/J MGP_AKRJ_G0020051
protein coding gene Chr12:111854039-111927480 (+)
BALB/cJ MGP_BALBcJ_G0020061
protein coding gene Chr12:109151347-109219568 (+)
C3H/HeJ MGP_C3HHeJ_G0019863
protein coding gene Chr12:112306916-112378753 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020506
protein coding gene Chr12:116532981-116669799 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018118
protein coding gene Chr12:105182163-105248722 (+)
CAST/EiJ MGP_CASTEiJ_G0019404
protein coding gene Chr12:107188947-107268796 (+)
CBA/J MGP_CBAJ_G0019830
protein coding gene Chr12:121065465-121135799 (+)
DBA/2J MGP_DBA2J_G0019947
protein coding gene Chr12:108213402-108282103 (+)
FVB/NJ MGP_FVBNJ_G0019932
protein coding gene Chr12:107013882-107082086 (+)
LP/J MGP_LPJ_G0020022
protein coding gene Chr12:112895839-112970372 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019970
protein coding gene Chr12:124178726-124273766 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020535
protein coding gene Chr12:111333994-111412367 (+)
PWK/PhJ MGP_PWKPhJ_G0019164
protein coding gene Chr12:102845032-102912977 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018968
protein coding gene Chr12:105524222-105593475 (+)
WSB/EiJ MGP_WSBEiJ_G0019462
protein coding gene Chr12:112255764-112347718 (+)



Homology
more
  • Human Ortholog
    WDR20, WD repeat domain 20
  • Vertebrate Orthologs
    10
  • Human Ortholog
    WDR20, WD repeat domain 20
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DMR
  • Links
    NCBI Gene ID: 91833
    neXtProt AC: NX_Q8TBZ3
    UniProt: Q8TBZ3

  • Chr Location
    14q32.31; chr14:102139518-102224686 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32684
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: WDR20
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037957 Ensembl Gene Model | MGI Sequence Detail 66295 C57BL/6J ±  kb
transcript ENSMUST00000095410 Ensembl | MGI Sequence Detail 2384 Not Applicable  
polypeptide ENSMUSP00000093059 Ensembl | MGI Sequence Detail 569 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR001680 WD40 repeat
    IPR017986 WD40-repeat-containing domain
    IPR036322 WD40-repeat-containing domain superfamily
    IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 7
Other
Accession IDs
less
MGI:2144859
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:205485 Yu C, et al., CRL4 complex regulates mammalian oocyte survival and reprogramming by activation of TET proteins. Science. 2013 Dec 20;342(6165):1518-21

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory