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Rab15
Gene Detail
Symbol

Name
ID
Rab15
RAB15, member RAS oncogene family
MGI:1916865
Synonyms
2310012G06Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 12
33.73 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:76797960-76822908 bp, - strand
From VEGA annotation of GRCm38

  24949 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:64471  Vertebrate Homology Class
1 mouse; 1 rat; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RAB15
Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab15

Human
homologs
RAB15, RAB15, member RAS oncogene family
Orthology source: HGNC

IDs:
NCBI Gene ID: 376267
neXtProt AC: NX_P59190

Human Chr (Location): 14q23.3; chr14:64945814-64972290 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Interactions
Rab15 interacts with 265 markers (Mir1a-1, Mir1a-2, Mir10a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process intracellular protein transport, protein localization to plasma membrane, ...
Component endosome membrane, membrane, ...
Function GTPase activity, GTP binding, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (4)    Tissues (4)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 4
cDNA source data(104)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rab15    NEW 
Molecular
reagents
All nucleic(105) cDNA(105)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000027558 (Evidence)
Ensembl Gene Model ENSMUSG00000021062 (Evidence)
Entrez Gene 104886 (Evidence)
UniGene 172847
DFCI TC1573018, TC1711527
DoTS DT.490570
NIA Mouse Gene Index U034093
Consensus CDS Project CCDS25997.1
International Mouse Phenotyping Consortium Status Rab15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027558 VEGA Gene Model | MGI Sequence Detail 24949 C57BL/6J ±  kb
transcript OTTMUST00000068242 VEGA | MGI Sequence Detail 3158 Not Applicable 
polypeptide OTTMUSP00000034453 VEGA | MGI Sequence Detail 212 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(9) UniProt(9)
Polymorphisms
SNPs within 2kb(125 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013587 ras-related protein Rab-15
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:220468 Walentin K, et al., A Grhl2-dependent gene network controls trophoblast branching morphogenesis. Development. 2015 Mar 15;142(6):1125-36
All references(34)
Other
accession IDs
MGI:2144892

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory