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Otop3 Gene Detail
Summary
  • Symbol
    Otop3
  • Name
    otopetrin 3
  • Synonyms
    2310011E08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916852
    NCBI Gene: 69602
Location & Maps
more
  • Sequence Map
    Chr11:115334731-115346927 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      12197 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 80.84 cM, cytoband E2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    OTOP3, otopetrin 3
  • Vertebrate Orthologs
    11
  • Human Ortholog
    OTOP3, otopetrin 3
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 347741
    neXtProt AC: NX_Q7RTS5

  • Chr Location
    17q25.1; chr17:74935802-74949992 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    6 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003747 VEGA Gene Model | MGI Sequence Detail 12197 C57BL/6J ±  kb
transcript OTTMUST00000008175 VEGA | MGI Sequence Detail 2369 Not Applicable  
polypeptide OTTMUSP00000003982 VEGA | MGI Sequence Detail 577 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    92 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 4
    Other 1

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:222308 Fairfield H, et al., Exome sequencing reveals pathogenic mutations in 91 strains of mice with Mendelian disorders. Genome Res. 2015 Jul;25(7):948-57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory