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2310022B05Rik
Gene Detail
Symbol

Name
ID
2310022B05Rik
RIKEN cDNA 2310022B05 gene
MGI:1916801
Feature Type
protein coding gene
Genetic Map
Chromosome 8
72.81 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:124635766-124663369 bp, - strand
From Ensembl annotation of GRCm38

  27604 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13120  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: C1orf198
Gene Tree: 2310022B05Rik

Human
homologs
C1orf198, chromosome 1 open reading frame 198
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 84886
neXtProt AC: NX_Q9H425

Human Chr (Location): 1q42.2; chr1:230837119-230869589 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
2310022B05Rik interacts with 216 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cytoplasm
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (46)    Tissues (8)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 46
cDNA source data(66)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(66) cDNA(66)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000031983 (Evidence)
Entrez Gene 69551 (Evidence)
UniGene 261920
DFCI TC1576831
DoTS DT.101362544, DT.529909
Consensus CDS Project CCDS22773.1
International Mouse Phenotyping Consortium Status 2310022B05Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031983 Ensembl Gene Model | MGI Sequence Detail 27604 C57BL/6J ±  kb
transcript ENSMUST00000034464 Ensembl | MGI Sequence Detail 3297 Not Applicable 
polypeptide ENSMUSP00000034464 Ensembl | MGI Sequence Detail 322 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(347 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory