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2310009B15Rik
Gene Detail
Symbol

Name
ID
2310009B15Rik
RIKEN cDNA 2310009B15 gene
MGI:1916799
Feature Type
protein coding gene
Genetic Map
Chromosome 1
60.82 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:138851983-138856852 bp, - strand
From VEGA annotation of GRCm38

  4870 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19923  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: C1orf53
Gene Tree: 2310009B15Rik

Human
homologs
C1orf53, chromosome 1 open reading frame 53
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 388722
neXtProt AC: NX_Q5VUE5

Human Chr (Location): 1q31.3; chr1:197902552-197907367 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Targeted(1)
Interactions
2310009B15Rik interacts with 26 markers (Mir27a, Mir194-1, Mir194-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(5)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) Genomic(1) cDNA(5)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000049925 (Evidence)
Ensembl Gene Model ENSMUSG00000079283 (Evidence)
Entrez Gene 69549 (Evidence)
DFCI TC1669870, TC1666403, TC1649476
DoTS DT.101219837, DT.94190768, DT.99848158, DT.94190772
NIA Mouse Gene Index U322851, U040937
Consensus CDS Project CCDS35727.1
International Mouse Phenotyping Consortium Status 2310009B15Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049925 VEGA Gene Model | MGI Sequence Detail 4870 C57BL/6J ±  kb
transcript OTTMUST00000127095 VEGA | MGI Sequence Detail 1017 Not Applicable 
polypeptide OTTMUSP00000068819 VEGA | MGI Sequence Detail 143 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(13 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory