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Capns2 Gene Detail
Summary
  • Symbol
    Capns2
  • Name
    calpain, small subunit 2
  • Synonyms
    2310005G05Rik, 30K-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916793
    NCBI Gene: 69543
Location & Maps
more
  • Sequence Map
    Chr8:92901407-92902411 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      1005 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 44.99 cM, cytoband C5
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CAPNS2, calpain small subunit 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CAPNS2, calpain small subunit 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84290
    neXtProt AC: NX_Q96L46

  • Chr Location
    16q12.2; chr16:55566672-55567680 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Other Mouse Links
  • Other Vertebrate Links
    Xenbase capns2
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024692 VEGA Gene Model | MGI Sequence Detail 1005 C57BL/6J ±  kb
transcript OTTMUST00000060733 VEGA | MGI Sequence Detail 1005 Not Applicable  
polypeptide OTTMUSP00000029659 VEGA | MGI Sequence Detail 247 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    81 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Gene Ontology 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:125385 Hata S, et al., Stomach-specific calpain, nCL-2/calpain 8, is active without calpain regulatory subunit and oligomerizes through C2-like domains. J Biol Chem. 2007 Sep 21;282(38):27847-56

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory