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1700030J22Rik Gene Detail
Summary
  • Symbol
    1700030J22Rik
  • Name
    RIKEN cDNA 1700030J22 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916778
    NCBI Gene: 69528
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:116969599-116978954 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 63.41 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916778
protein coding gene Chr8:116969594-116978959 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034168
protein coding gene Chr8:120090109-120099455 (-)
A/J MGP_AJ_G0034148
protein coding gene Chr8:115211679-115221023 (-)
AKR/J MGP_AKRJ_G0034075
protein coding gene Chr8:118559504-118568847 (-)
BALB/cJ MGP_BALBcJ_G0034142
protein coding gene Chr8:115405901-115415243 (-)
C3H/HeJ MGP_C3HHeJ_G0033853
protein coding gene Chr8:119282408-119291786 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034662
protein coding gene Chr8:124168113-124179334 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031604
protein coding gene Chr8:108140685-108149839 (-)
CAST/EiJ MGP_CASTEiJ_G0033180
protein coding gene Chr8:119102814-119114276 (-)
CBA/J MGP_CBAJ_G0033826
protein coding gene Chr8:128648553-128657898 (-)
DBA/2J MGP_DBA2J_G0033982
protein coding gene Chr8:114436595-114445940 (-)
FVB/NJ MGP_FVBNJ_G0033925
protein coding gene Chr8:113412127-113421505 (-)
LP/J MGP_LPJ_G0034071
protein coding gene Chr8:120221855-120232899 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033972
protein coding gene Chr8:131244286-131256136 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034680
protein coding gene Chr8:118649844-118659192 (-)
PWK/PhJ MGP_PWKPhJ_G0032882
protein coding gene Chr8:114133693-114143304 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032722
protein coding gene Chr8:117339804-117349922 (-)
WSB/EiJ MGP_WSBEiJ_G0033296
protein coding gene Chr8:119359415-119368666 (-)



Homology
more
  • Human Ortholog
    C16orf46, chromosome 16 open reading frame 46
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C16orf46, chromosome 16 open reading frame 46
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 123775
    neXtProt AC: NX_Q6P387
    UniProt: Q6P387

  • Chr Location
    16q23.2; chr16:81053497-81077267 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69528 NCBI Gene Model | MGI Sequence Detail 9356 C57BL/6J ±  kb
transcript NM_001357253 RefSeq | MGI Sequence Detail 3008 Not Specified  
polypeptide Q8BHB7 UniProt | EBI | MGI Sequence Detail 409 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027836 Protein of unknown function DUF4529
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 4
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory