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Tsr2 Gene Detail
Summary
  • Symbol
    Tsr2
  • Name
    TSR2 20S rRNA accumulation
  • Synonyms
    2310007F12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916749
    NCBI Gene: 69499
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:151087094-151096543 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 68.46 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    57 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916749
protein coding gene ChrX:151087094-151096543 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036175
protein coding gene ChrX:148819094-148828475 (-)
A/J MGP_AJ_G0036151
protein coding gene ChrX:148029372-148038782 (-)
AKR/J MGP_AKRJ_G0036077
protein coding gene ChrX:152813989-152823438 (-)
BALB/cJ MGP_BALBcJ_G0036142
protein coding gene ChrX:146220741-146231475 (-)
C3H/HeJ MGP_C3HHeJ_G0035850
protein coding gene ChrX:149027742-149041878 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036667
protein coding gene ChrX:153031573-153041386 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033491
protein coding gene ChrX:139792358-139800477 (-)
CAST/EiJ MGP_CASTEiJ_G0035141
protein coding gene ChrX:128467689-128478243 (-)
CBA/J MGP_CBAJ_G0035827
protein coding gene ChrX:157575183-157586131 (-)
DBA/2J MGP_DBA2J_G0035985
protein coding gene ChrX:147113452-147122894 (-)
FVB/NJ MGP_FVBNJ_G0035919
protein coding gene ChrX:146254100-146263922 (-)
LP/J MGP_LPJ_G0036076
protein coding gene ChrX:149901427-149910873 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035955
protein coding gene ChrX:165665593-165675540 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036702
protein coding gene ChrX:148323756-148333218 (-)
PWK/PhJ MGP_PWKPhJ_G0034835
protein coding gene ChrX:125437203-125446969 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034661
protein coding gene ChrX:128924238-128935271 (-)
WSB/EiJ MGP_WSBEiJ_G0035276
protein coding gene ChrX:146426095-146436603 (-)



Homology
more
  • Human Ortholog
    TSR2, TSR2 ribosome maturation factor
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TSR2, TSR2 ribosome maturation factor
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DBA14, DT1P1A10, WGG1
  • Links
    NCBI Gene ID: 90121
    neXtProt AC: NX_Q969E8
    UniProt: Q969E8

  • Chr Location
    Xp11.22; chrX:54440420-54445297 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 43235
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TSR2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69499 NCBI Gene Model | MGI Sequence Detail 9450 C57BL/6J ±  kb
transcript NM_001164578 RefSeq | MGI Sequence Detail 3814 C57BL/6  
polypeptide Q8C8T8 UniProt | EBI | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/22/2019
MGI 6.14
The Jackson Laboratory