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2300009A05Rik Gene Detail
Summary
  • Symbol
    2300009A05Rik
  • Name
    RIKEN cDNA 2300009A05 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916728
    NCBI Gene: 69478
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:63394447-63399244 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 34.06 cM, cytoband D
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916728
protein coding gene Chr9:63394447-63399246 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034929
protein coding gene Chr9:62988405-62993204 (-)
A/J MGP_AJ_G0034909
protein coding gene Chr9:60901713-60906512 (-)
AKR/J MGP_AKRJ_G0034839
protein coding gene Chr9:62317693-62322492 (-)
BALB/cJ MGP_BALBcJ_G0034902
protein coding gene Chr9:60628644-60633443 (-)
C3H/HeJ MGP_C3HHeJ_G0034612
protein coding gene Chr9:62832957-62837756 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035421
protein coding gene Chr9:64719983-64724782 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032332
protein coding gene Chr9:60561561-60566305 (-)
CAST/EiJ MGP_CASTEiJ_G0033933
protein coding gene Chr9:62981795-62986594 (-)
CBA/J MGP_CBAJ_G0034583
protein coding gene Chr9:66947253-66952052 (-)
DBA/2J MGP_DBA2J_G0034742
protein coding gene Chr9:60689942-60694750 (-)
FVB/NJ MGP_FVBNJ_G0034684
protein coding gene Chr9:59987126-59991925 (-)
LP/J MGP_LPJ_G0034825
protein coding gene Chr9:63272380-63277179 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034727
protein coding gene Chr9:68265615-68270938 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035443
protein coding gene Chr9:62404655-62409454 (-)
PWK/PhJ MGP_PWKPhJ_G0033637
protein coding gene Chr9:60828935-60833863 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033471
protein coding gene Chr9:62679799-62684587 (-)
WSB/EiJ MGP_WSBEiJ_G0034046
protein coding gene Chr9:62309336-62314135 (-)



Homology
more
  • Human Ortholog
    C15orf61, chromosome 15 open reading frame 61
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C15orf61, chromosome 15 open reading frame 61
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 145853
    neXtProt AC: NX_A6NNL5
    UniProt: A6NNL5

  • Chr Location
    15q23; chr15:67521184-67527303 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving 2300009A05Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69478 NCBI Gene Model | MGI Sequence Detail 4798 C57BL/6J ±  kb
transcript NM_027090 RefSeq | MGI Sequence Detail 612 C57BL/6  
polypeptide Q0VG49 UniProt | EBI | MGI Sequence Detail 157 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR029245 Protein of unknown function DUF4528
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 6
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory