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Tmco2 Gene Detail
Summary
  • Symbol
    Tmco2
  • Name
    transmembrane and coiled-coil domains 2
  • Synonyms
    1700028F16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916719
    NCBI Gene: 69469
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:121105651-121109226 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 56.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916719
protein coding gene Chr4:121105651-121109226 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028721
protein coding gene Chr4:122413996-122417571 (-)
A/J MGP_AJ_G0028681
protein coding gene Chr4:117577696-117581271 (-)
AKR/J MGP_AKRJ_G0028634
protein coding gene Chr4:120180996-120184571 (-)
BALB/cJ MGP_BALBcJ_G0028704
protein coding gene Chr4:118198233-118201808 (-)
C3H/HeJ MGP_C3HHeJ_G0028419
protein coding gene Chr4:121700588-121704163 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029145
protein coding gene Chr4:127019320-127022895 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026422
protein coding gene Chr4:111619371-111623591 (-)
CAST/EiJ MGP_CASTEiJ_G0027850
protein coding gene Chr4:119073875-119077450 (-)
CBA/J MGP_CBAJ_G0028386
protein coding gene Chr4:130473294-130476869 (-)
DBA/2J MGP_DBA2J_G0028533
protein coding gene Chr4:118160496-118164071 (-)
FVB/NJ MGP_FVBNJ_G0028499
protein coding gene Chr4:116678075-116681650 (-)
LP/J MGP_LPJ_G0028633
protein coding gene Chr4:122537038-122540613 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028527
protein coding gene Chr4:135274786-135278361 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029182
protein coding gene Chr4:121245623-121249198 (-)
PWK/PhJ MGP_PWKPhJ_G0027573
protein coding gene Chr4:115107095-115110670 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027399
protein coding gene Chr4:117673246-117676688 (-)
WSB/EiJ MGP_WSBEiJ_G0027930
protein coding gene Chr4:121266723-121270298 (-)



Homology
more
  • Human Ortholog
    TMCO2, transmembrane and coiled-coil domains 2
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TMCO2, transmembrane and coiled-coil domains 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ39G22.2
  • Links
    NCBI Gene ID: 127391
    neXtProt AC: NX_Q7Z6W1
    UniProt: Q7Z6W1

  • Chr Location
    1p34.2; chr1:40247901-40251693 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69469 NCBI Gene Model | MGI Sequence Detail 3576 C57BL/6J ±  kb
transcript NM_001081312 RefSeq | MGI Sequence Detail 719 Not Specified  
polypeptide P0C1V4 UniProt | EBI | MGI Sequence Detail 183 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031697 Transmembrane and coiled-coil domain-containing protein 2
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory