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Efcab15 Gene Detail
Summary
  • Symbol
    Efcab15
  • Name
    EF-hand calcium binding domain 15
  • Synonyms
    1700023F06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916691
    NCBI Gene: 69441
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:103089769-103099374 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 66.75 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916691
protein coding gene Chr11:103089769-103099384 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019259
protein coding gene Chr11:106256506-106265920 (-)
A/J MGP_AJ_G0019227
protein coding gene Chr11:101747711-101756920 (-)
AKR/J MGP_AKRJ_G0019196
protein coding gene Chr11:104881370-104890924 (-)
BALB/cJ MGP_BALBcJ_G0019201
protein coding gene Chr11:102214469-102224045 (-)
C3H/HeJ MGP_C3HHeJ_G0019010
protein coding gene Chr11:105109202-105121096 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019650
protein coding gene Chr11:109560422-109570484 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017276
protein coding gene Chr11:99156115-99164682 (-)
CAST/EiJ MGP_CASTEiJ_G0018564
protein coding gene Chr11:106128890-106139563 (-)
CBA/J MGP_CBAJ_G0018979
protein coding gene Chr11:114114516-114126581 (-)
DBA/2J MGP_DBA2J_G0019091
protein coding gene Chr11:101253915-101263909 (-)
FVB/NJ MGP_FVBNJ_G0019081
protein coding gene Chr11:100798166-100807711 (-)
LP/J MGP_LPJ_G0019160
protein coding gene Chr11:106766473-106775734 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019112
protein coding gene Chr11:113492640-113506709 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019688
protein coding gene Chr11:105265960-105276589 (-)
PWK/PhJ MGP_PWKPhJ_G0018327
protein coding gene Chr11:102326552-102336419 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018119
protein coding gene Chr11:105016657-105026205 (-)
WSB/EiJ MGP_WSBEiJ_G0018613
protein coding gene Chr11:105263998-105275209 (-)



Homology
more
  • Human Ortholog
    EFCAB15P, EF-hand calcium binding domain 15, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    EFCAB15P, EF-hand calcium binding domain 15, pseudogene
  • Links
    NCBI Gene ID: 118568824

  • Chr Location
    17q21.31

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 69441 NCBI Gene Model | MGI Sequence Detail 9606 C57BL/6J ±  kb
transcript NM_001254724 RefSeq | MGI Sequence Detail 1199 C57BL/6  
polypeptide NP_001241653 RefSeq | MGI Sequence Detail 382 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Phenotypes 8
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/09/2022
MGI 6.21
The Jackson Laboratory