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1700025G04Rik Gene Detail
Summary
  • Symbol
    1700025G04Rik
  • Name
    RIKEN cDNA 1700025G04 gene
  • Synonyms
    2610510E02Rik, 2900042O04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916649
    NCBI Gene: 69399
  • Gene Overview
    MyGene.info: C1orf21
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:151884524-152090320 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 64.43 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2640 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916649
protein coding gene Chr1:151852403-152090320 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016585
protein coding gene Chr1:156603274-156855337 (-)
A/J MGP_AJ_G0016567
protein coding gene Chr1:150282871-150525335 (-)
AKR/J MGP_AKRJ_G0016532
protein coding gene Chr1:154921748-155172118 (-)
BALB/cJ MGP_BALBcJ_G0016527
protein coding gene Chr1:150856847-151093789 (-)
C3H/HeJ MGP_C3HHeJ_G0016352
protein coding gene Chr1:155036282-155280198 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016988
protein coding gene Chr1:162018792-162277298 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014697
protein coding gene Chr1:142613092-142847198 (-)
CAST/EiJ MGP_CASTEiJ_G0015931
protein coding gene Chr1:154489543-154745506 (-)
CBA/J MGP_CBAJ_G0016326
protein coding gene Chr1:167717625-167981821 (-)
DBA/2J MGP_DBA2J_G0016432
protein coding gene Chr1:149322373-149552495 (-)
FVB/NJ MGP_FVBNJ_G0016430
protein coding gene Chr1:147777386-148008090 (-)
LP/J MGP_LPJ_G0016503
protein coding gene Chr1:157719298-157890979 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016456
protein coding gene Chr1:175396345-175649462 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017024
protein coding gene Chr1:154681374-154927507 (-)
PWK/PhJ MGP_PWKPhJ_G0015717
protein coding gene Chr1:148293145-148534499 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015504
protein coding gene Chr1:153517990-153762428 (-)
WSB/EiJ MGP_WSBEiJ_G0015994
protein coding gene Chr1:154770555-155010080 (-)



Homology
more
  • Human Ortholog
    C1orf21, chromosome 1 open reading frame 21
  • Vertebrate Orthologs
    11
  • Human Ortholog
    C1orf21, chromosome 1 open reading frame 21
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PIG13
  • Links
    NCBI Gene ID: 81563
    neXtProt AC: NX_Q9H246
    UniProt: Q9H246

  • Chr Location
    1q25.3; chr1:184387016-184629021 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Targeted
    1
  • Genomic Mutations
    2 involving 1700025G04Rik
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69399 NCBI Gene Model | MGI Sequence Detail 205797 C57BL/6J ±  kb
transcript NM_197990 RefSeq | MGI Sequence Detail 9789 C57BL/6  
polypeptide Q8K207 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR027967 Protein of unknown function DUF4612
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 9
Other
Accession IDs
less
MGI:1920178, MGI:1923793, MGI:2138524, MGI:3642523
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory