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Slc38a4 Gene Detail
Summary
  • Symbol
    Slc38a4
  • Name
    solute carrier family 38, member 4
  • Synonyms
    1110012E16Rik, 1700012A18Rik, Ata3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916604
    NCBI Gene: 69354
Location & Maps
more
  • Sequence Map
    Chr15:96994823-97055956 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      61134 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 52.77 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLC38A4, solute carrier family 38 member 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC38A4, solute carrier family 38 member 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATA3, NAT3, PAAT, SNAT4
  • Links
    NCBI Gene ID: 55089
    neXtProt AC: NX_Q969I6

  • Chr Location
    12q13; chr12:46764761-46832422 (-)  GRCh38.p2

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    31 phenotype references
  • All Mutations and Alleles
    131
  • Chemically induced (other)
    1
  • Gene trapped
    124
  • Radiation induced
    2
  • Targeted
    4
  • Genomic Mutations
    3 involving Slc38a4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022464 Ensembl Gene Model | MGI Sequence Detail 61134 C57BL/6J ±  kb
transcript ENSMUST00000023101 Ensembl | MGI Sequence Detail 3932 Not Applicable  
polypeptide ENSMUSP00000023101 Ensembl | MGI Sequence Detail 547 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    366 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000015121 sodium-coupled neutral amino acid transporter 4
  • InterPro Domains
    IPR013057 Amino acid transporter, transmembrane domain
Molecular
Reagents
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  • All nucleic 156
    cDNA 153
    Primer pair 3

    Microarray probesets 4
Other
Accession IDs
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MGI:1923562
References
more
  • Summaries
    All 47
    Developmental Gene Expression 10
    Diseases 1
    Gene Ontology 3
    Phenotypes 31
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:205506 Monnier P, et al., H19 lncRNA controls gene expression of the Imprinted Gene Network by recruiting MBD1. Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20693-8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory