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1700008O03Rik
Gene Detail
Symbol

Name
ID
1700008O03Rik
RIKEN cDNA 1700008O03 gene
MGI:1916599
Feature Type
protein coding gene
Genetic Map
Chromosome 7
28.83 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:44360043-44385820 bp, - strand
From VEGA annotation of GRCm38

  25778 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19260  Vertebrate Homology Class
1 human; 1 mouse; 1 cattle; 1 dog

Gene Tree: 1700008O03Rik

Human
homologs
Human Homolog C19orf81, chromosome 19 open reading frame 81
NCBI Gene ID 342918
neXtProt AC  NX_C9J6K1
Human Chr (Location)  19q13.33; chr19:50632761-50659690 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(36) : Gene trapped(34) Targeted(2)
Incidental mutations (data from APF )
Interactions
1700008O03Rik interacts with 33 markers (Mir16-1, Mir27a, Mir27b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000023974 (Evidence)
Ensembl Gene ModelENSMUSG00000008028 (Evidence)
Entrez Gene69349 (Evidence)
UniGene358922
DFCITC1589461
DoTSDT.40152723
NIA Mouse Gene IndexU028485
Consensus CDS ProjectCCDS52230.1
International Mouse Knockout Project Status1700008O03Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023974 VEGA Gene Model | MGI Sequence Detail 25778 C57BL/6J ±  kb
transcript OTTMUST00000058595 VEGA | MGI Sequence Detail 913 Not Applicable 
polypeptide OTTMUSP00000028418 VEGA | MGI Sequence Detail 196 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(8) UniProt(2)
Polymorphisms
SNPs within 2kb(151 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory