1700008O03Rik MGI Mouse Gene Detail - MGI:1916599

Symbol

1700008O03Rik
Name

RIKEN cDNA 1700008O03 gene

Feature Type

protein coding gene
IDs

MGI:1916599
NCBI Gene: 69349
Alliance

genome feature page
Transcription Start Sites

1 TSS

Sequence Map

Chr7:44009467-44035116 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 7, 28.83 cM, cytoband B2
Mapping Data

2 experiments

SNPs within 2kb

622 from dbSNP Build 142
Strain Annotations

14

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916599	protein coding gene	Chr7:44009467-44035244 (-)
129S1/SvImJ	ENSMUSG00200022659	protein coding gene	Chr7:31601151-31616134 (-)
A/J	ENSMUSG00195045269	protein coding gene	Chr7:35629615-35644603 (-)
AKR/J	ENSMUSG00220053256	protein coding gene	Chr7:29934061-29949055 (-)
BALB/cJ	ENSMUSG00180033763	protein coding gene	Chr7:32505036-32520023 (-)
C3H/HeJ	ENSMUSG00175030125	protein coding gene	Chr7:33037092-33052093 (-)
C57BL/6NJ	ENSMUSG00215042269	protein coding gene	Chr7:32298784-32313777 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029656	protein coding gene	Chr7:46304138-46328434 (-)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210043994	protein coding gene	Chr7:33408483-33423465 (-)
DBA/2J	ENSMUSG00185038808	protein coding gene	Chr7:37275429-37290561 (-)
FVB/NJ	ENSMUSG00205042179	protein coding gene	Chr7:32953698-32968693 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230050710	protein coding gene	Chr7:42704108-42719058 (-)
NOD/ShiLtJ	ENSMUSG00190043573	protein coding gene	Chr7:33275912-33290907 (-)
NZO/HlLtJ	ENSMUSG00225015998	protein coding gene	Chr7:40915201-40930193 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Ortholog

C19orf81, chromosome 19 open reading frame 81

Vertebrate Orthologs

2

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

C19orf81, chromosome 19 open reading frame 81
Links

HGNC:40041

NCBI Gene ID: 342918

UniProt: C9J6K1
Chr Location

19q13.33; chr19:50648792-50659310 (+) GRCh38

MGI Vertebrate Homology

1700008O03Rik stringent orthology
1 human;1 mouse;1 rat
HCOP

vertebrate homology predictions: C19orf81
Gene Tree

1700008O03Rik

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
8 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

35
Gene trapped

33
Targeted

2
Incidental Mutations

APF
Find Mice (IMSR)

35 strains or lines available

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

10

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

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All Sequences

48
RefSeq

16
UniProt

3
CCDS

CCDS52230.1

Ensembl

ENSMUSG00000008028 (Evidence)
NCBI Gene

69349

			Length	Strain/Species	Flank
genomic	69349	NCBI Gene Model \| MGI Sequence Detail	25650	C57BL/6J	± kb
transcript	NM_027049	RefSeq \| MGI Sequence Detail	925	C57BL/6
polypeptide	D3Z070	UniProt \| EBI \| MGI Sequence Detail	196	Not Applicable

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UniProt

3 Sequences
Protein Ontology

PR:000059729 putative uncharacterized protein C19orf81

(term hierarchy)
InterPro Domains

IPR031746 Protein of unknown function DUF4732

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All nucleic 10

cDNA 10

Microarray probesets 2

Summaries

All 26

Phenotypes 8
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for 1700008O03Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr72196	Chr7:44024430-44024459 (-)	10,671 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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