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1700012B09Rik Gene Detail
Summary
  • Symbol
    1700012B09Rik
  • Name
    RIKEN cDNA 1700012B09 gene
  • Synonyms
    1700007P19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916575
    NCBI Gene: 69325
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:14756592-14771034 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 4.31 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916575
protein coding gene Chr9:14756587-14771034 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034354
protein coding gene Chr9:11709723-11723661 (-)
A/J MGP_AJ_G0034332
protein coding gene Chr9:11655844-11670481 (-)
AKR/J MGP_AKRJ_G0034260
protein coding gene Chr9:11668906-11682834 (-)
BALB/cJ MGP_BALBcJ_G0034326
protein coding gene Chr9:11429843-11443933 (-)
C3H/HeJ MGP_C3HHeJ_G0034037
protein coding gene Chr9:11964798-11978888 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034848
protein coding gene Chr9:12093467-12110042 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031786
protein coding gene Chr9:10954467-10968390 (-)
CAST/EiJ MGP_CASTEiJ_G0033364
protein coding gene Chr9:11802466-11822329 (-)
CBA/J MGP_CBAJ_G0034010
protein coding gene Chr9:12660618-12677452 (-)
DBA/2J MGP_DBA2J_G0034167
protein coding gene Chr9:11533871-11548372 (-)
FVB/NJ MGP_FVBNJ_G0034112
protein coding gene Chr9:11126430-11141236 (-)
LP/J MGP_LPJ_G0034253
protein coding gene Chr9:11808711-11825420 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034156
protein coding gene Chr9:13703962-13719458 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034867
protein coding gene Chr9:11675362-11689310 (-)
PWK/PhJ MGP_PWKPhJ_G0033070
protein coding gene Chr9:11599281-11618099 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032906
protein coding gene Chr9:11777324-11791656 (-)
WSB/EiJ MGP_WSBEiJ_G0033480
protein coding gene Chr9:11531964-11548467 (-)



Homology
more
  • Human Ortholog
    C11orf97, chromosome 11 open reading frame 97
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C11orf97, chromosome 11 open reading frame 97
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LINC01171
  • Links
    NCBI Gene ID: 643037
    neXtProt AC: NX_A0A1B0GVM6
    UniProt: A0A1B0GVM6

  • Chr Location
    11q21; chr11:94512529-94532123 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69325 NCBI Gene Model | MGI Sequence Detail 14443 C57BL/6J ±  kb
transcript NM_029306 RefSeq | MGI Sequence Detail 696 C57BL/6  
polypeptide Q9DAE7 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
Molecular
Reagents
less
  • All nucleic 23
    cDNA 19
    Primer pair 4

    Microarray probesets 3
Other
Accession IDs
less
MGI:1922731
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:249115 Stauber M, et al., 1700012B09Rik, a FOXJ1 effector gene active in ciliated tissues of the mouse but not essential for motile ciliogenesis. Dev Biol. 2017 Sep 1;429(1):186-199

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory