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Cfap299 Gene Detail
Summary
  • Symbol
    Cfap299
  • Name
    cilia and flagella associated protein 299
  • Synonyms
    1700007G11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916571
    NCBI Gene: 75784
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:98329304-98802047 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 47.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2721 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916571
protein coding gene Chr5:98329042-98802053 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029774
protein coding gene Chr5:99687746-100178417 (+)
A/J MGP_AJ_G0029740
protein coding gene Chr5:95994354-96475556 (+)
AKR/J MGP_AKRJ_G0029686
protein coding gene Chr5:99169766-99667405 (+)
BALB/cJ MGP_BALBcJ_G0029750
protein coding gene Chr5:97004323-97482545 (+)
C3H/HeJ MGP_C3HHeJ_G0029473
protein coding gene Chr5:99519286-100001669 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030205
protein coding gene Chr5:103880844-104395390 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027440
protein coding gene Chr5:91288335-91766339 (+)
CAST/EiJ MGP_CASTEiJ_G0028884
protein coding gene Chr5:98126006-98632198 (+)
CBA/J MGP_CBAJ_G0029443
protein coding gene Chr5:107456209-107992012 (+)
DBA/2J MGP_DBA2J_G0029587
protein coding gene Chr5:96185928-96662152 (+)
FVB/NJ MGP_FVBNJ_G0029546
protein coding gene Chr5:95002092-95476097 (+)
LP/J MGP_LPJ_G0029675
protein coding gene Chr5:100292800-100792057 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029575
protein coding gene Chr5:112529285-113096956 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030238
protein coding gene Chr5:98611024-99111137 (+)
PWK/PhJ MGP_PWKPhJ_G0028602
protein coding gene Chr5:94589174-95093116 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028437
protein coding gene Chr5:96285920-96798886 (+)
WSB/EiJ MGP_WSBEiJ_G0028962
protein coding gene Chr5:98951871-99443464 (+)



Homology
more
  • Human Ortholog
    CFAP299, cilia and flagella associated protein 299
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CFAP299, cilia and flagella associated protein 299
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C4orf22
  • Links
    NCBI Gene ID: 255119
    neXtProt AC: NX_Q6V702
    UniProt: Q6V702

  • Chr Location
    4q21.21; chr4:80321265-80963756 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 2 genetic backgrounds
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000057816 Ensembl Gene Model | MGI Sequence Detail 472744 C57BL/6J ±  kb
    transcript ENSMUST00000080333 Ensembl | MGI Sequence Detail 861 Not Applicable  
    polypeptide ENSMUSP00000079208 Ensembl | MGI Sequence Detail 233 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR027887 Protein of unknown function DUF4464
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 5

      Microarray probesets 3
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 2
      Phenotypes 15
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.
    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory