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Cfap299 Gene Detail
Summary
  • Symbol
    Cfap299
  • Name
    cilia and flagella associated protein 299
  • Synonyms
    1700007G11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916571
    NCBI Gene: 75784
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:98329304-98802047 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 47.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2721 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916571
protein coding gene Chr5:98329138-98802053 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029774
protein coding gene Chr5:99687746-100178417 (+)
A/J MGP_AJ_G0029740
protein coding gene Chr5:95994354-96475556 (+)
AKR/J MGP_AKRJ_G0029686
protein coding gene Chr5:99169766-99667405 (+)
BALB/cJ MGP_BALBcJ_G0029750
protein coding gene Chr5:97004323-97482545 (+)
C3H/HeJ MGP_C3HHeJ_G0029473
protein coding gene Chr5:99519286-100001669 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030205
protein coding gene Chr5:103880844-104395390 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027440
protein coding gene Chr5:91288335-91766339 (+)
CAST/EiJ MGP_CASTEiJ_G0028884
protein coding gene Chr5:98126006-98632198 (+)
CBA/J MGP_CBAJ_G0029443
protein coding gene Chr5:107456209-107992012 (+)
DBA/2J MGP_DBA2J_G0029587
protein coding gene Chr5:96185928-96662152 (+)
FVB/NJ MGP_FVBNJ_G0029546
protein coding gene Chr5:95002092-95476097 (+)
LP/J MGP_LPJ_G0029675
protein coding gene Chr5:100292800-100792057 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029575
protein coding gene Chr5:112529285-113096956 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030238
protein coding gene Chr5:98611024-99111137 (+)
PWK/PhJ MGP_PWKPhJ_G0028602
protein coding gene Chr5:94589174-95093116 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028437
protein coding gene Chr5:96285920-96798886 (+)
WSB/EiJ MGP_WSBEiJ_G0028962
protein coding gene Chr5:98951871-99443464 (+)



Homology
more
  • Human Ortholog
    CFAP299, cilia and flagella associated protein 299
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CFAP299, cilia and flagella associated protein 299
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C4orf22
  • Links
    NCBI Gene ID: 255119
    neXtProt AC: NX_Q6V702
    UniProt: Q6V702

  • Chr Location
    4q21.21; chr4:80321265-80963756 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    14 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    3 involving Cfap299
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Mice homozygous for a knock-out allele exhibit normal viability and male fertility.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057816 Ensembl Gene Model | MGI Sequence Detail 472744 C57BL/6J ±  kb
transcript ENSMUST00000080333 Ensembl | MGI Sequence Detail 861 Not Applicable  
polypeptide ENSMUSP00000079208 Ensembl | MGI Sequence Detail 233 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027887 Protein of unknown function DUF4464
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 14
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:273583 Li H, et al., Cloning of a new testis-enriched gene C4orf22 and its role in cell cycle and apoptosis in mouse spermatogenic cells. Mol Biol Rep. 2019 Apr;46(2):2029-2038

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory