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Efcab9 Gene Detail
Summary
  • Symbol
    Efcab9
  • Name
    EF-hand calcium binding domain 9
  • Synonyms
    1700007I06Rik, 4930403C08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916556
    NCBI Gene: 69306
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:32522751-32532081 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 18.97 cM, cytoband A5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916556
protein coding gene Chr11:32522733-32533270 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018136
protein coding gene Chr11:30758080-30772241 (-)
A/J MGP_AJ_G0018109
protein coding gene Chr11:29583622-29592885 (-)
AKR/J MGP_AKRJ_G0018073
protein coding gene Chr11:30521082-30530459 (-)
BALB/cJ MGP_BALBcJ_G0018078
protein coding gene Chr11:29775749-29785130 (-)
C3H/HeJ MGP_C3HHeJ_G0017891
protein coding gene Chr11:30459900-30470672 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018532
protein coding gene Chr11:31763334-31774109 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016187
protein coding gene Chr11:28107829-28117403 (-)
CAST/EiJ MGP_CASTEiJ_G0017455
protein coding gene Chr11:30497263-30514676 (-)
CBA/J MGP_CBAJ_G0017864
protein coding gene Chr11:33272781-33284609 (-)
DBA/2J MGP_DBA2J_G0017974
protein coding gene Chr11:29376805-29386862 (-)
FVB/NJ MGP_FVBNJ_G0017968
protein coding gene Chr11:29202424-29211752 (-)
LP/J MGP_LPJ_G0018046
protein coding gene Chr11:31019893-31031027 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017992
protein coding gene Chr11:34246614-34257628 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018571
protein coding gene Chr11:30650735-30661782 (-)
PWK/PhJ MGP_PWKPhJ_G0017236
protein coding gene Chr11:29533559-29544026 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017028
protein coding gene Chr11:30348923-30360059 (-)
WSB/EiJ MGP_WSBEiJ_G0017504
protein coding gene Chr11:30283418-30296746 (-)



Homology
more
  • Human Ortholog
    EFCAB9, EF-hand calcium binding domain 9
  • Vertebrate Orthologs
    8
  • Human Ortholog
    EFCAB9, EF-hand calcium binding domain 9
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 285588
    neXtProt AC: NX_A8MZ26
    UniProt: A8MZ26

  • Chr Location
    5q35.1; chr5:172188061-172203454 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Targeted
    1
  • Genomic Mutations
    1 involving Efcab9
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044056 Ensembl Gene Model | MGI Sequence Detail 9331 C57BL/6J ±  kb
transcript ENSMUST00000054327 Ensembl | MGI Sequence Detail 754 Not Applicable  
polypeptide ENSMUSP00000060205 Ensembl | MGI Sequence Detail 216 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 3
Other
Accession IDs
less
MGI:1921194
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory