Spata4
Gene Detail

Symbol Name ID

Spata4 spermatogenesis associated 4 MGI:1916531

Synonyms

1700001N01Rik, SRG2, TSARG2

Feature Type

protein coding gene

Genetic Map

Chromosome 8

29.27 cM, cytoband B3.1
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr8:54600781-54610098 bp, + strand From NCBI annotation of GRCm38   9318 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:15868  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Spata4

Human homologs

Human Homolog		SPATA4, spermatogenesis associated 4
NCBI Gene ID		132851
neXtProt AC		NX_Q8NEY3
Human Synonyms		SPEF1B, TSARG2
Human Chr (Location)		4q34.2; chr4:177105725-177116822 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Targeted(3)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cytoplasm
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(4)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(4) cDNA(4)
Microarray probesets(3)

Other database links

Ensembl Gene Model	ENSMUSG00000031518 (Evidence)
Entrez Gene	69281 (Evidence)
DFCI	TC1580800
DoTS	DT.40151039, DT.94227464
NIA Mouse Gene Index	U009345
Consensus CDS Project	CCDS22308.1
International Mouse Knockout Project Status	Spata4

Sequences

Length	Strain/Species
genomic	69281	NCBI Gene Model | MGI Sequence Detail	9318	C57BL/6J
transcript	NM_133711	RefSeq | MGI Sequence Detail	1087	Not Specified
polypeptide	Q8K3V1	UniProt | EBI | MGI Sequence Detail	295	Not Applicable

All sequences(16) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(90 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR010441	Protein of unknown function DUF1042
Protein Ontology	PR:000015491	spermatogenesis-associated protein 4

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)