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Spata4 Gene Detail
Summary
  • Symbol
    Spata4
  • Name
    spermatogenesis associated 4
  • Synonyms
    1700001N01Rik, SRG2, TSARG2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916531
    NCBI Gene: 69281
Location & Maps
more
  • Sequence Map
    Chr8:54600781-54610098 bp, + strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      9318 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.27 cM, cytoband B3.1
  • Detailed Genetic Map ± 1 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SPATA4, spermatogenesis associated 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SPATA4, spermatogenesis associated 4
    Orthology source: HomoloGene
  • Synonyms
    SPEF1B, TSARG2
  • Links
    NCBI Gene ID: 132851
    neXtProt AC: NX_Q8NEY3

  • Chr Location
    4q34.2; chr4:176184574-176195671 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Spata4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 69281 NCBI Gene Model | MGI Sequence Detail 9318 C57BL/6J ±  kb
transcript NM_133711 RefSeq | MGI Sequence Detail 1087 Not Specified  
polypeptide Q8K3V1 UniProt | EBI | MGI Sequence Detail 295 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    105 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000015491 spermatogenesis-associated protein 4
  • InterPro Domains
    IPR010441 CH-like domain in sperm protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:201298 Duarte DT, et al., A yeast two hybrid screen identifies SPATA4 as a TRAPP interactor. FEBS Lett. 2011 Sep 2;585(17):2676-81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/24/2016
MGI 6.04
The Jackson Laboratory