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Zfp397 Gene Detail
Summary
  • Symbol
    Zfp397
  • Name
    zinc finger protein 397
  • Synonyms
    2810411K16Rik, 6720480F11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916506
    NCBI Gene: 69256
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:24087749-24097730 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 12.44 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    277 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916506
 protein coding gene Chr18:24085798-24098030 (+)
129S1/SvImJ ENSMUSG00200015976
 protein coding gene Chr18:21084662-21102713 (+)
A/J ENSMUSG00195002321
 protein coding gene Chr18:21243129-21276577 (+)
AKR/J ENSMUSG00220011015
 protein coding gene Chr18:21239486-21257553 (+)
BALB/cJ ENSMUSG00180003287
 protein coding gene Chr18:21692538-21710606 (+)
C3H/HeJ ENSMUSG00175022663
 protein coding gene Chr18:21200202-21233654 (+)
C57BL/6NJ ENSMUSG00215015924
 protein coding gene Chr18:20944336-20962403 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022043
 protein coding gene Chr18:20955526-20967087 (+)
CAST/EiJ ENSTCUG00005016037
 protein coding gene Chr18:20941163-20955309 (+)
CBA/J ENSMUSG00210016037
 protein coding gene Chr18:21242162-21260229 (+)
DBA/2J ENSMUSG00185022092
 protein coding gene Chr18:21187355-21205422 (+)
FVB/NJ ENSMUSG00205018185
 protein coding gene Chr18:20913805-20931872 (+)
JF1/MsJ ENSUMUG00000018965
 protein coding gene Chr18:21283057-21323078 (+)
LP/J ENSMUSG00230005811
 protein coding gene Chr18:23280579-23298646 (+)
NOD/ShiLtJ ENSMUSG00190006700
 protein coding gene Chr18:21001876-21019944 (+)
NZO/HlLtJ ENSMUSG00225025293
 protein coding gene Chr18:23223472-23256920 (+)
PWK/PhJ ENSLUMG00010003469
 protein coding gene Chr18:21466676-21506718 (+)
SPRET/EiJ ENSMSPG00010020601
 protein coding gene Chr18:21410418-21429561 (+)
WSB/EiJ ENSIUOG00005002614
 protein coding gene Chr18:21012628-21045927 (+)



Homology
more
  • Human Ortholog
    ZNF397, zinc finger protein 397
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF397, zinc finger protein 397
  • Synonyms
    ZNF47, ZSCAN15
  • Links
    NCBI Gene ID: 84307
    UniProt: Q8NF99

  • Chr Location
    18q12.2; chr18:35240508-35267133 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    634
  • Tissues
    37
  • cDNA Data
    66
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024276 Ensembl Gene Model | MGI Sequence Detail 9982 C57BL/6J ±  kb
transcript ENSMUST00000060762 Ensembl | MGI Sequence Detail 5472 Not Applicable  
polypeptide ENSMUSP00000057253 Ensembl | MGI Sequence Detail 527 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 67
    cDNA 66
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2147233, MGI:2443092
References
more
  • Summaries
    All 35
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory