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2010016I18Rik Gene Detail
Summary
  • Symbol
    2010016I18Rik
  • Name
    RIKEN cDNA 2010016I18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916456
    NCBI Gene: 69206
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:106481986-106485913 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916456
lncRNA gene Chr3:106481982-106485913 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015517
unclassified non-coding RNA gene Chr3:107948056-107951976 (-)
A/J MGP_AJ_G0015494
unclassified non-coding RNA gene Chr3:104517689-104521678 (-)
AKR/J MGP_AKRJ_G0015458
unclassified non-coding RNA gene Chr3:107072880-107076822 (-)
BALB/cJ MGP_BALBcJ_G0015456
unclassified non-coding RNA gene Chr3:104215438-104219379 (-)
C3H/HeJ MGP_C3HHeJ_G0015279
unclassified non-coding RNA gene Chr3:107403227-107407167 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015910
unclassified non-coding RNA gene Chr3:111966326-111970249 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013645
unclassified non-coding RNA gene Chr3:100699359-100703276 (-)
CAST/EiJ MGP_CASTEiJ_G0014833
unclassified non-coding RNA gene Chr3:106780177-106784053 (-)
CBA/J MGP_CBAJ_G0015260
unclassified non-coding RNA gene Chr3:115760202-115764130 (-)
DBA/2J MGP_DBA2J_G0015354
unclassified non-coding RNA gene Chr3:103723489-103728113 (-)
FVB/NJ MGP_FVBNJ_G0015361
unclassified non-coding RNA gene Chr3:101632593-101636521 (-)
LP/J MGP_LPJ_G0015433
unclassified non-coding RNA gene Chr3:109322754-109326680 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015385
unclassified non-coding RNA gene Chr3:121836689-121840630 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015951
unclassified non-coding RNA gene Chr3:106634015-106637922 (-)
PWK/PhJ MGP_PWKPhJ_G0014619
unclassified non-coding RNA gene Chr3:103455740-103459648 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014407
unclassified non-coding RNA gene Chr3:104762225-104766172 (-)
WSB/EiJ MGP_WSBEiJ_G0014939
unclassified non-coding RNA gene Chr3:107201381-107205311 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 2010016I18Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 69206 NCBI Gene Model | MGI Sequence Detail 3928 C57BL/6J ±  kb
transcript NR_033207 RefSeq | MGI Sequence Detail 1558 C57BL/6  
polypeptide Q3V2Y2 UniProt | EBI | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Diseases 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory