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Ptms Gene Detail
Summary
  • Symbol
    Ptms
  • Name
    parathymosin
  • Synonyms
    2610009E16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916452
    NCBI Gene: 69202
  • Gene Overview
    MyGene.info: PTMS
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:124913675-124917946 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 59.17 cM, cytoband F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916452
 protein coding gene Chr6:124913675-124920103 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031277
 protein coding gene Chr6:128229000-128235449 (-)
A/J MGP_AJ_G0031247
 protein coding gene Chr6:123399581-123406002 (-)
AKR/J MGP_AKRJ_G0031175
 protein coding gene Chr6:126767854-126774275 (-)
BALB/cJ MGP_BALBcJ_G0031255
 protein coding gene Chr6:123000313-123006731 (-)
C3H/HeJ MGP_C3HHeJ_G0030978
 protein coding gene Chr6:126817037-126823816 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031711
 protein coding gene Chr6:131608856-131618990 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028861
 protein coding gene Chr6:120611411-120617781 (-)
CAST/EiJ MGP_CASTEiJ_G0030359
 protein coding gene Chr6:127030014-127036398 (-)
CBA/J MGP_CBAJ_G0030939
 protein coding gene Chr6:136643880-136650316 (-)
DBA/2J MGP_DBA2J_G0031095
 protein coding gene Chr6:122329048-122335828 (-)
FVB/NJ MGP_FVBNJ_G0031045
 protein coding gene Chr6:121230808-121239236 (-)
LP/J MGP_LPJ_G0031175
 protein coding gene Chr6:128398228-128404650 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031083
 protein coding gene Chr6:140695507-140701927 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031746
 protein coding gene Chr6:126658729-126666324 (-)
PWK/PhJ MGP_PWKPhJ_G0030074
 protein coding gene Chr6:120560225-120566632 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029903
 protein coding gene Chr6:124745758-124752080 (-)
WSB/EiJ MGP_WSBEiJ_G0030444
 protein coding gene Chr6:127024045-127030462 (-)



Homology
more
  • Human Ortholog
    PTMS, parathymosin
  • Human Ortholog
    PTMS, parathymosin
    Orthology source: HGNC
  • Synonyms
    ParaT
  • Links
    NCBI Gene ID: 5763
    neXtProt AC: NX_P20962
    UniProt: P20962

  • Chr Location
    12p13.31; chr12:6766139-6770952 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    44
  • Tissues
    44
  • cDNA Data
    178
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 69202 NCBI Gene Model | MGI Sequence Detail 4272 C57BL/6J ±  kb
    transcript NM_026988 RefSeq | MGI Sequence Detail 1155 C57BL/6  
    polypeptide Q9D0J8 UniProt | EBI | MGI Sequence Detail 101 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 178
      cDNA 178

      Microarray probesets 5
    References
    more
    • Summaries
      All 36
      Developmental Gene Expression 3
      Gene Ontology 1
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
    Warranty Disclaimer & Copyright Notice
    Send questions and comments to User Support.     		last database update
    11/06/2018
    MGI 6.13     		The Jackson Laboratory