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Cnppd1 Gene Detail
Summary
  • Symbol
    Cnppd1
  • Name
    cyclin Pas1/PHO80 domain containing 1
  • Synonyms
    1810031K17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916421
    NCBI Gene: 69171
Location & Maps
more
  • Sequence Map
    Chr1:75134554-75142711 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      8158 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 38.60 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CNPPD1, cyclin Pas1/PHO80 domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CNPPD1, cyclin Pas1/PHO80 domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C2orf24, CGI-57
  • Links
    NCBI Gene ID: 27013
    neXtProt AC: NX_Q9BV87

  • Chr Location
    2q35; chr2:219171897-219178164 (-)  GRCh38.p2

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Cnppd1
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048448 VEGA Gene Model | MGI Sequence Detail 8158 C57BL/6J ±  kb
transcript OTTMUST00000124176 VEGA | MGI Sequence Detail 3669 Not Applicable  
polypeptide OTTMUSP00000067611 VEGA | MGI Sequence Detail 407 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    12 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 101
    cDNA 101

    Microarray probesets 4
Other
Accession IDs
less
MGI:2138501
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 2
    Phenotypes 20
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:213512 Werber M, et al., The tissue-specific transcriptomic landscape of the mid-gestational mouse embryo. Development. 2014 Jun;141(11):2325-30

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory