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Trim15 Gene Detail
Summary
  • Symbol
    Trim15
  • Name
    tripartite motif-containing 15
  • Synonyms
    1810012B10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916347
    NCBI Gene: 69097
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:37171583-37178102 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, 19.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916347
protein coding gene Chr17:37171582-37179066 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023683
protein coding gene Chr17:37210421-37216940 (-)
A/J MGP_AJ_G0023641
protein coding gene Chr17:36039955-36046997 (-)
AKR/J MGP_AKRJ_G0023612
protein coding gene Chr17:36474347-36481070 (-)
BALB/cJ MGP_BALBcJ_G0023648
protein coding gene Chr17:36281102-36287619 (-)
C3H/HeJ MGP_C3HHeJ_G0023410
protein coding gene Chr17:36988139-36994862 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024086
protein coding gene Chr17:38809388-38815907 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021554
protein coding gene Chr17:33852921-33859525 (-)
CAST/EiJ MGP_CASTEiJ_G0022895
protein coding gene Chr17:37116558-37123078 (-)
CBA/J MGP_CBAJ_G0023387
protein coding gene Chr17:40324231-40330958 (-)
DBA/2J MGP_DBA2J_G0023512
protein coding gene Chr17:35432353-35438913 (-)
FVB/NJ MGP_FVBNJ_G0023485
protein coding gene Chr17:35041686-35048208 (-)
LP/J MGP_LPJ_G0023590
protein coding gene Chr17:37744010-37750529 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023508
protein coding gene Chr17:39120571-39127086 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024131
protein coding gene Chr17:36812414-36818977 (-)
PWK/PhJ MGP_PWKPhJ_G0022647
protein coding gene Chr17:34209446-34216066 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022466
protein coding gene Chr17:34894412-34900948 (-)
WSB/EiJ MGP_WSBEiJ_G0022962
protein coding gene Chr17:37126781-37134236 (-)



Homology
more
  • Human Ortholog
    TRIM15, tripartite motif containing 15
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRIM15, tripartite motif containing 15
  • Synonyms
    RNF93, ZNF178, ZNFB7
  • Links
    NCBI Gene ID: 89870
    neXtProt AC: NX_Q9C019
    UniProt: Q9C019

  • Chr Location
    6p22.1; chr6:30163206-30172693 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050747 Ensembl Gene Model | MGI Sequence Detail 6520 C57BL/6J ±  kb
transcript ENSMUST00000174195 Ensembl | MGI Sequence Detail 1778 Not Applicable  
polypeptide ENSMUSP00000133953 Ensembl | MGI Sequence Detail 292 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR000315 B-box-type zinc finger
    IPR013083 Zinc finger, RING/FYVE/PHD-type
    IPR001841 Zinc finger, RING-type
    IPR017907 Zinc finger, RING-type, conserved site
    IPR027370 Zinc finger, RING-type, eukaryotic
Molecular
Reagents
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  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory