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Snapc3 Gene Detail
Summary
  • Symbol
    Snapc3
  • Name
    small nuclear RNA activating complex, polypeptide 3
  • Synonyms
    1810020H02Rik, 4930558A07Rik, 5031401C21Rik, E030018J20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916338
    NCBI Gene: 77634
  • Gene Overview
    MyGene.info: SNAPC3
Location & Maps
more
  • Sequence Map
    Chr4:83417724-83467676 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      49953 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 39.46 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SNAPC3, small nuclear RNA activating complex polypeptide 3
  • Vertebrate Orthologs
    11
  • Human Ortholog
    SNAPC3, small nuclear RNA activating complex polypeptide 3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PTFbeta, SNAP50
  • Links
    NCBI Gene ID: 6619
    neXtProt AC: NX_Q92966

  • Chr Location
    9p22.3; chr9:15422696-15466751 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    66
  • Chemically induced (other)
    2
  • Gene trapped
    62
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    3 involving Snapc3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000033 VEGA Gene Model | MGI Sequence Detail 49953 C57BL/6J ±  kb
transcript OTTMUST00000000099 VEGA | MGI Sequence Detail 2710 Not Applicable  
polypeptide OTTMUSP00000047133 VEGA | MGI Sequence Detail 407 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    244 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000015318 snRNA-activating protein complex subunit 3
  • InterPro Domains
    IPR022042 snRNA-activating protein complex, subunit 3
Molecular
Reagents
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  • All nucleic 22
    cDNA 21
    Primer pair 1

    Microarray probesets 10
Other
Accession IDs
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MGI:1914912, MGI:1924884, MGI:2140255, MGI:2442899
References
more
  • Summaries
    All 33
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory