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Ebna1bp2 Gene Detail
Summary
  • Symbol
    Ebna1bp2
  • Name
    EBNA1 binding protein 2
  • Synonyms
    1810014B19Rik, B830003A16Rik, Ebp2, Nobp, p40
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916322
    NCBI Gene: 69072
  • Gene Overview
    MyGene.info: EBNA1BP2
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:118620799-118627776 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 54.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916322
protein coding gene Chr4:118620799-118627776 (.)
129S1/SvImJ MGP_129S1SvImJ_G0028674
protein coding gene Chr4:119690475-119697276 (+)
A/J MGP_AJ_G0028635
protein coding gene Chr4:115038088-115045068 (+)
AKR/J MGP_AKRJ_G0028585
protein coding gene Chr4:117571793-117580397 (+)
BALB/cJ MGP_BALBcJ_G0028656
protein coding gene Chr4:115676492-115683277 (+)
C3H/HeJ MGP_C3HHeJ_G0028370
protein coding gene Chr4:119131694-119139037 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029097
protein coding gene Chr4:124255485-124262939 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026381
protein coding gene Chr4:109056288-109063296 (+)
CAST/EiJ MGP_CASTEiJ_G0027804
protein coding gene Chr4:116397279-116404668 (+)
CBA/J MGP_CBAJ_G0028337
protein coding gene Chr4:127665393-127672736 (+)
DBA/2J MGP_DBA2J_G0028485
protein coding gene Chr4:115656999-115663979 (+)
FVB/NJ MGP_FVBNJ_G0028453
protein coding gene Chr4:114165033-114172190 (+)
LP/J MGP_LPJ_G0028587
protein coding gene Chr4:119868655-119875456 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028480
protein coding gene Chr4:132539023-132546000 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029134
protein coding gene Chr4:118712304-118719280 (+)
PWK/PhJ MGP_PWKPhJ_G0027530
protein coding gene Chr4:112492333-112499535 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027353
protein coding gene Chr4:115025491-115032276 (+)
WSB/EiJ MGP_WSBEiJ_G0027883
protein coding gene Chr4:118621701-118628681 (+)



Homology
more
  • Human Ortholog
    EBNA1BP2, EBNA1 binding protein 2
  • Vertebrate Orthologs
    11
  • Human Ortholog
    EBNA1BP2, EBNA1 binding protein 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    EBP2, NOBP, P40
  • Links
    NCBI Gene ID: 10969
    neXtProt AC: NX_Q99848
    UniProt: Q99848

  • Chr Location
    1p34.2; chr1:43164174-43172570 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    5
  • Genomic Mutations
    4 involving Ebna1bp2
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 69072 NCBI Gene Model | MGI Sequence Detail 6978 C57BL/6J ±  kb
transcript NM_026932 RefSeq | MGI Sequence Detail 2960 C57BL/6  
polypeptide Q9D903 UniProt | EBI | MGI Sequence Detail 306 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR008610 Eukaryotic rRNA processing
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 5
Other
Accession IDs
less
MGI:1925793, MGI:2140691, MGI:2141837
References
more
  • Summaries
    All 39
    Gene Ontology 4
    Phenotypes 11
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory