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Trappc2l Gene Detail
Summary
  • Symbol
    Trappc2l
  • Name
    trafficking protein particle complex 2-like
  • Synonyms
    1810017G16Rik, Tca17
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916295
    NCBI Gene: 59005
Location & Maps
more
  • Sequence Map
    Chr8:122611626-122615588 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3963 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 71.92 cM, cytoband E1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TRAPPC2L, trafficking protein particle complex 2 like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRAPPC2L, trafficking protein particle complex 2 like
    Orthology source: HGNC, HomoloGene
  • Synonyms
    HSPC176
  • Links
    NCBI Gene ID: 51693
    neXtProt AC: NX_Q9UL33

  • Chr Location
    16q24.3; chr16:88857098-88862678 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000015013 Ensembl Gene Model | MGI Sequence Detail 3963 C57BL/6J ±  kb
transcript ENSMUST00000015157 Ensembl | MGI Sequence Detail 607 Not Applicable  
polypeptide ENSMUSP00000015157 Ensembl | MGI Sequence Detail 139 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    122 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000016613 trafficking protein particle complex subunit 2-like protein
  • InterPro Domains
    IPR011012 Longin-like domain
    IPR006722 Trafficking protein particle complex subunit 2
Molecular
Reagents
less
  • All nucleic 72
    cDNA 72

    Microarray probesets 3
Other
Accession IDs
less
MGI:1927554
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:64911 Inoue S, et al., Growth suppression of Escherichia coli by induction of expression of mammalian genes with transmembrane or ATPase domains. Biochem Biophys Res Commun. 2000 Feb 16;268(2):553-61
  • Latest
    J:130260 Van Dyck F, et al., Loss of the PlagL2 transcription factor affects lacteal uptake of chylomicrons. Cell Metab. 2007 Nov;6(5):406-13

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory