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Atg2a Gene Detail
Summary
  • Symbol
    Atg2a
  • Name
    autophagy related 2A
  • Synonyms
    1810013C15Rik, MGC:67447, mKIAA0404
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916291
    NCBI Gene: 329015
Location & Maps
more
  • Sequence Map
    Chr19:6241668-6262335 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20668 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 4.37 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ATG2A, autophagy related 2A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATG2A, autophagy related 2A
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 23130
    neXtProt AC: NX_Q2TAZ0

  • Chr Location
    11q13.1; chr11:64894532-64917250 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018614 VEGA Gene Model | MGI Sequence Detail 20668 C57BL/6J ±  kb
transcript OTTMUST00000044796 VEGA | MGI Sequence Detail 6371 Not Applicable  
polypeptide OTTMUSP00000020158 VEGA | MGI Sequence Detail 1914 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    149 from dbSNP Build 142
Protein
Information
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  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000004411 autophagy-related protein 2 homolog A
  • InterPro Domains
    IPR015412 Autophagy-related, C-terminal
    IPR026849 Autophagy-related protein 2
    IPR026885 Autophagy-related protein 2 CAD motif
    IPR026854 Vacuolar protein sorting-associated protein 13, N-terminal domain
Molecular
Reagents
less
  • All nucleic 98
    cDNA 98

    Microarray probesets 3
Other
Accession IDs
less
MGI:2448512
References
more
  • Summaries
    All 32
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:186989 Nicola AM, et al., Macrophage Autophagy in Immunity to Cryptococcus neoformans and Candida albicans. Infect Immun. 2012 Sep;80(9):3065-76

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory