About   Help   FAQ
Atg2a Gene Detail
Summary
  • Symbol
    Atg2a
  • Name
    autophagy related 2A
  • Synonyms
    1810013C15Rik, MGC:67447, mKIAA0404
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916291
    NCBI Gene: 329015
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:6291698-6312365 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 4.37 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    149 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916291
 protein coding gene Chr19:6291508-6312365 (+)
129S1/SvImJ ENSMUSG00200043905
 protein coding gene Chr19:3054132-3074817 (+)
A/J ENSMUSG00195049376
 protein coding gene Chr19:3461926-3482607 (+)
AKR/J ENSMUSG00220049512
 protein coding gene Chr19:3227930-3248611 (+)
BALB/cJ ENSMUSG00180042428
 protein coding gene Chr19:3829511-3850196 (+)
C3H/HeJ ENSMUSG00175011470
 protein coding gene Chr19:3079674-3100355 (+)
C57BL/6NJ ENSMUSG00215045183
 protein coding gene Chr19:3292478-3313163 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022602
 protein coding gene Chr19:3027548-3048048 (+)
CAST/EiJ ENSTCUG00005042089
 protein coding gene Chr19:3212878-3233673 (+)
CBA/J ENSMUSG00210041362
 protein coding gene Chr19:3082447-3104156 (+)
DBA/2J ENSMUSG00185044851
 protein coding gene Chr19:3458923-3480632 (+)
FVB/NJ ENSMUSG00205043824
 protein coding gene Chr19:3460847-3481585 (+)
JF1/MsJ ENSUMUG00000015572
 protein coding gene Chr19:3428647-3448722 (+)
LP/J ENSMUSG00230053037
 protein coding gene Chr19:4360999-4381684 (+)
NOD/ShiLtJ ENSMUSG00190024132
 protein coding gene Chr19:2989248-3009929 (+)
NZO/HlLtJ ENSMUSG00225025384
 protein coding gene Chr19:8069811-8090496 (+)
PWK/PhJ ENSLUMG00010004075
 protein coding gene Chr19:3195145-3215206 (+)
SPRET/EiJ ENSMSPG00010047415
 protein coding gene Chr19:3190411-3210306 (+)
WSB/EiJ ENSIUOG00005040915
 protein coding gene Chr19:3102426-3123229 (+)



Homology
more
  • Human Ortholog
    ATG2A, autophagy related 2A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATG2A, autophagy related 2A
  • Synonyms
    BLTP4A
  • Links
    NCBI Gene ID: 23130
    UniProt: Q2TAZ0

  • Chr Location
    11q13.1; chr11:64894531-64917245 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    98
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024773 Ensembl Gene Model | MGI Sequence Detail 20668 C57BL/6J ±  kb
transcript ENSMUST00000045351 Ensembl | MGI Sequence Detail 6371 Not Applicable  
polypeptide ENSMUSP00000046412 Ensembl | MGI Sequence Detail 1914 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 99
    cDNA 99

    Microarray probesets 3
Other
Accession IDs
less
MGI:2448512
References
more
  • Summaries
    All 43
    Gene Ontology 7
    Phenotypes 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory