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Lyzl4 Gene Detail
Summary
  • Symbol
    Lyzl4
  • Name
    lysozyme-like 4
  • Synonyms
    1810009N24Rik, LYC4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916282
    NCBI Gene: 69032
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:121577841-121641566 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 72.45 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    581 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916282
protein coding gene Chr9:121577841-121642096 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035443
protein coding gene Chr9:124517677-124584965 (-)
A/J MGP_AJ_G0035424
protein coding gene Chr9:119782024-119847874 (-)
AKR/J MGP_AKRJ_G0035357
protein coding gene Chr9:122965898-123037833 (-)
BALB/cJ MGP_BALBcJ_G0035420
protein coding gene Chr9:119687305-119754400 (-)
C3H/HeJ MGP_C3HHeJ_G0035127
protein coding gene Chr9:123426801-123497300 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035943
protein coding gene Chr9:127926666-127999891 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032825
protein coding gene Chr9:116943858-117009384 (-)
CAST/EiJ MGP_CASTEiJ_G0034432
protein coding gene Chr9:123467293-123534894 (-)
CBA/J MGP_CBAJ_G0035095
protein coding gene Chr9:132608294-132685600 (-)
DBA/2J MGP_DBA2J_G0035254
protein coding gene Chr9:119223132-119287990 (-)
FVB/NJ MGP_FVBNJ_G0035201
protein coding gene Chr9:118140858-118208061 (-)
LP/J MGP_LPJ_G0035333
protein coding gene Chr9:124856514-124927627 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035242
protein coding gene Chr9:133562375-133632670 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035962
protein coding gene Chr9:123413954-123481119 (-)
PWK/PhJ MGP_PWKPhJ_G0034136
protein coding gene Chr9:119682396-119749205 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033973
protein coding gene Chr9:123525695-123596217 (-)
WSB/EiJ MGP_WSBEiJ_G0034552
protein coding gene Chr9:123258909-123333620 (-)



Homology
more
  • Human Ortholog
    LYZL4, lysozyme like 4
  • Vertebrate Orthologs
    6
  • Human Ortholog
    LYZL4, lysozyme like 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LYC4, LYZA
  • Links
    NCBI Gene ID: 131375
    neXtProt AC: NX_Q96KX0
    UniProt: Q96KX0

  • Chr Location
    3p22.1; chr3:42360767-42427911 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69032 NCBI Gene Model | MGI Sequence Detail 63726 C57BL/6J ±  kb
transcript NM_026915 RefSeq | MGI Sequence Detail 1023 C57BL/6  
polypeptide Q9D925 UniProt | EBI | MGI Sequence Detail 145 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 5
Other
Accession IDs
less
MGI:2143084
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory