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Snx15
Gene Detail
Symbol

Name
ID
Snx15
sorting nexin 15
MGI:1916274
Synonyms
1500032B08Rik, E130013C21Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 19
4.34 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:6119399-6128304 bp, - strand
From VEGA annotation of GRCm38

  8906 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12294  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: Snx15

Human
homologs
Human Homolog SNX15, sorting nexin 15
NCBI Gene ID 29907
neXtProt AC  NX_Q9NRS6
Human Synonyms  HSAF001435
Human Chr (Location)  11q12; chr11:65027408-65040572 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(12) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Snx15 interacts with 73 markers (Mir26a-1, Mir26a-2, Mir26b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process protein transport, transport
Component cytoplasm, cytoplasmic vesicle, ...
Function lipid binding, phosphatidylinositol binding
External Resources: FuncBase
Expression
cDNA source data(39)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(42) cDNA(42)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000034056 (Evidence)
Ensembl Gene ModelENSMUSG00000024787 (Evidence)
Entrez Gene69024 (Evidence)
UniGene329629
DFCITC1577870
DoTSDT.531039
NIA Mouse Gene IndexU019018
Consensus CDS ProjectCCDS29495.1
International Mouse Knockout Project StatusSnx15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034056 VEGA Gene Model | MGI Sequence Detail 8906 C57BL/6J ±  kb
transcript OTTMUST00000086014 VEGA | MGI Sequence Detail 1635 Not Applicable 
polypeptide OTTMUSP00000046522 VEGA | MGI Sequence Detail 337 Not Applicable 

For the selected sequences
All sequences(53) RefSeq(10) UniProt(7)
Polymorphisms
SNPs within 2kb(10 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007330 MIT
InterPro IPR001683 Phox homologous domain
Protein Ontology PR:000015364 sorting nexin-15
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(29)
Other
accession IDs
MGI:2442017

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory