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Rint1 Gene Detail
Summary
  • Symbol
    Rint1
  • Name
    RAD50 interactor 1
  • Synonyms
    1500019C06Rik, 2810450M21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916233
    NCBI Gene: 72772
  • Gene Overview
    MyGene.info: RINT1
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:23787711-23820369 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 10.45 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    372 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916233
protein coding gene Chr5:23787674-23820369 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029332
protein coding gene Chr5:21473989-21508570 (+)
A/J MGP_AJ_G0029298
protein coding gene Chr5:20752953-20785366 (+)
AKR/J MGP_AKRJ_G0029249
protein coding gene Chr5:21592531-21630197 (+)
BALB/cJ MGP_BALBcJ_G0029309
protein coding gene Chr5:21261063-21295571 (+)
C3H/HeJ MGP_C3HHeJ_G0029029
protein coding gene Chr5:21680897-21718830 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029762
protein coding gene Chr5:22945321-22983844 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027000
protein coding gene Chr5:18710999-18745738 (+)
CAST/EiJ MGP_CASTEiJ_G0028441
protein coding gene Chr5:20865313-20896464 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0029147
protein coding gene Chr5:21035504-21070204 (+)
FVB/NJ MGP_FVBNJ_G0029105
protein coding gene Chr5:20425729-20460647 (+)
LP/J MGP_LPJ_G0029231
protein coding gene Chr5:21858902-21895284 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029134
protein coding gene Chr5:24451272-24491537 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029796
protein coding gene Chr5:21194074-21236682 (+)
PWK/PhJ MGP_PWKPhJ_G0028164
protein coding gene Chr5:20101332-20137750 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027996
protein coding gene Chr5:20569215-20603966 (+)
WSB/EiJ MGP_WSBEiJ_G0028521
protein coding gene Chr5:21287263-21323410 (+)



Homology
more
  • Human Ortholog
    RINT1, RAD50 interactor 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RINT1, RAD50 interactor 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RINT-1
  • Links
    NCBI Gene ID: 60561
    neXtProt AC: NX_Q6NUQ1
    UniProt: Q6NUQ1

  • Chr Location
    7q22.3; chr7:105532085-105567688 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11070
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RINT1
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotypes from 2 alleles in 2 genetic backgrounds
    21 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a mutant allele exhibit early embryonic lethality. Mice heterozygous for a mutant allele exhibit premature death with a life span of 24 months and increased multiple tumor incidence.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000028999 Ensembl Gene Model | MGI Sequence Detail 32659 C57BL/6J ±  kb
    transcript ENSMUST00000030852 Ensembl | MGI Sequence Detail 3298 Not Applicable  
    polypeptide ENSMUSP00000030852 Ensembl | MGI Sequence Detail 792 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 19
      cDNA 19

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1920022
    References
    more
    • Summaries
      All 47
      Developmental Gene Expression 2
      Diseases 1
      Gene Ontology 5
      Phenotypes 21
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:245196 Otterpohl KL, et al., Evaluation of Rint1 as a modifier of intestinal tumorigenesis and cancer risk. PLoS One. 2017;12(3):e0172247

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory