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Paqr6
Gene Detail
Symbol

Name
ID
Paqr6
progestin and adipoQ receptor family member VI
MGI:1916207
Synonyms
1500001B10Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 3
38.81 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr3:88364584-88368541 bp, + strand
From VEGA annotation of GRCm38

  3958 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19746  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PAQR6
Protein SuperFamily: membrane receptor, ADIPOR type
Gene Tree: Paqr6

Human
homologs
PAQR6, progestin and adipoQ receptor family member VI
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 79957
neXtProt AC: NX_Q6TCH4

Human Synonyms: PRdelta

Human Chr (Location): 1q22; chr1:156243321-156248488 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Paqr6 interacts with 66 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component integral component of membrane, membrane
Function receptor activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (91)    Tissues (13)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 91
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase LOC100494988    NEW 
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000032750 (Evidence)
Ensembl Gene Model ENSMUSG00000041423 (Evidence)
Entrez Gene 68957 (Evidence)
UniGene 441486
DoTS DT.111044379, DT.482380, DT.94202194
NIA Mouse Gene Index U064320, U096272
Consensus CDS Project CCDS17471.1
International Mouse Phenotyping Consortium Status Paqr6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000032750 VEGA Gene Model | MGI Sequence Detail 3958 C57BL/6J ±  kb
transcript OTTMUST00000081512 VEGA | MGI Sequence Detail 1670 Not Applicable 
polypeptide OTTMUSP00000043627 VEGA | MGI Sequence Detail 343 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(14) UniProt(3)
Polymorphisms
SNPs within 2kb(2 from dbSNP Build 137)    SNPs within 2kb including multiple locations(4)
Protein-related
information
ResourceIDDescription
InterPro IPR004254 Hly-III-related
Protein Ontology PR:000030423 progestin and adipoQ receptor family member 6
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory