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Zfas1 Gene Detail
Summary
  • Symbol
    Zfas1
  • Name
    zinc finger, NFX1-type containing 1, antisense RNA 1
  • Synonyms
    1500012F01Rik, Zfos1
  • Feature Type
    unclassified non-coding RNA gene
  • IDs
    MGI:1916199
    NCBI Gene: 68949
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr2:167062934-167065862 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      2929 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 87.22 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ZFAS1, ZNFX1 antisense RNA 1
  • Human Ortholog
    ZFAS1, ZNFX1 antisense RNA 1
    Orthology source: HGNC
  • Synonyms
    C20orf199, HSUP1, HSUP2, NCRNA00275, ZNFX1-AS1
  • Links
    NCBI Gene ID: 441951

  • Chr Location
    20q13.13; chr20:49278178-49289260 (+)  GRCh38.p7

  • HCOP
    human homology predictions: ZFAS1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001137 VEGA Gene Model | MGI Sequence Detail 2929 C57BL/6J ±  kb
transcript OTTMUST00000038849 VEGA | MGI Sequence Detail 2302 Not Applicable  
polypeptide Q3V494 UniProt | EBI | MGI Sequence Detail 79 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    4 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 39
    cDNA 39

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:230787 Askarian-Amiri ME, et al., SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer. RNA. 2011 May;17(5):878-91

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/09/2018
MGI 6.12
The Jackson Laboratory