Aspscr1
Gene Detail

Symbol Name ID

Aspscr1 alveolar soft part sarcoma chromosome region, candidate 1 (human) MGI:1916188

Synonyms

1190006K01Rik, ASPC, ASPCR1, ASPL, RCC17, TUG

Feature Type

protein coding gene

Genetic Map

Chromosome 11

84.41 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr11:120672973-120709447 bp, + strand From VEGA annotation of GRCm38   36475 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Aspscr1 ± 2 cM)

Gene Tree: Aspscr1

Human ortholog

ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1 NCBI Gene ID 79058
Human Synonyms: ASPCR1, ASPL, ASPS, RCC17, TUG, UBXD9, UBXN9
Human Chr17:79935426-79975282 bp, + strand Reference GRCh37.p2 Primary Assembly
Human Diseases Associated with Human ASPSCR1 (1)

Alleles and phenotypes

All alleles(53) : Targeted(6) Gene trapped(47)

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	glucose homeostasis, intracellular protein transport, ...
Component	cytosol, extrinsic to membrane, ...
Function	protein binding

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (4)    Tissues (4)   
Theiler Stages: 22, 28

Assay Type	Results
RT-PCR	4

cDNA source data(93)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(95) cDNA(94) Primer pair(1)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000004078 (Evidence)
Ensembl Gene Model	ENSMUSG00000025142 (Evidence)
Entrez Gene	68938 (Evidence)
UniGene	294020
DFCI	TC1573030
DoTS	DT.101344991, DT.101736762, DT.491848, DT.99862678
NIA Mouse Gene Index	U013672
PDB	2AL3
Consensus CDS Project	CCDS25751.1, CCDS25752.1, CCDS49008.1
International Mouse Knockout Project Status	Aspscr1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000004078	VEGA Gene Model | MGI Sequence Detail	36475	C57BL/6J
transcript	OTTMUST00000009139	VEGA | MGI Sequence Detail	1820	Not Applicable
polypeptide	OTTMUSP00000004448	VEGA | MGI Sequence Detail	550	Not Applicable

All sequences(136) RefSeq(6) UniProt(15)

Polymorphisms

SNPs(52 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR021569	GLUT4 regulating protein TUG
InterPro	IPR001012	UBX
Protein Ontology	PR:000004384	tether containing UBX domain for GLUT4

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Other accession IDs

MGI:2144062