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Aspscr1
Gene Detail
 Symbol
Name
ID
Aspscr1
alveolar soft part sarcoma chromosome region, candidate 1 (human)
MGI:1916188
Synonyms 1190006K01Rik, ASPC, ASPCR1, ASPL, RCC17, TUG
Feature Type protein coding gene
Genetic Map
Chromosome 11
84.41 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr11:120672973-120709447 bp, + strand
From VEGA annotation of GRCm38

  36475 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41550  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Aspscr1

Human
homologs
Human Homolog ASPSCR1, alveolar soft part sarcoma chromosome region, candidate 1
NCBI Gene ID 79058
neXtProt AC  NX_Q9BZE9
Human Synonyms  ASPCR1, ASPL, ASPS, RCC17, TUG, UBXD9, UBXN9
Human Chr (Location)  17q25.3; chr17:81977550-82017406 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human ASPSCR1
Mutations,
alleles, and
phenotypes
All mutations/alleles(53) : Gene trapped(47) Targeted(6)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Aspscr1 interacts with 78 markers (Mir1b, Mir7b, Mir17, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process glucose homeostasis, intracellular protein transport, ...
Component cytoplasm, cytoplasmic side of plasma membrane, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (4)    Tissues (4)   
Theiler Stages: 22, 28
Assay TypeResults
RT-PCR 4
cDNA source data(91)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(93) cDNA(92) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000004078 (Evidence)
Ensembl Gene ModelENSMUSG00000025142 (Evidence)
Entrez Gene68938 (Evidence)
UniGene294020
DFCITC1573030
DoTSDT.101344991, DT.101736762, DT.491848, DT.99862678
NIA Mouse Gene IndexU013672
PDB2AL3
Consensus CDS ProjectCCDS25751.1, CCDS25752.1, CCDS49008.1
International Mouse Knockout Project StatusAspscr1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004078 VEGA Gene Model | MGI Sequence Detail 36475 C57BL/6J ±  kb
transcript OTTMUST00000009139 VEGA | MGI Sequence Detail 1820 Not Applicable 
polypeptide OTTMUSP00000004448 VEGA | MGI Sequence Detail 550 Not Applicable 

For the selected sequences
All sequences(144) RefSeq(14) UniProt(15)
Polymorphisms SNPs within 2kb(60 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR021569 GLUT4 regulating protein TUG
InterPro IPR001012 UBX
Protein Ontology PR:000004384 tether containing UBX domain for GLUT4
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:201782 Loffler MG, et al., Enhanced fasting glucose turnover in mice with disrupted action of TUG protein in skeletal muscle. J Biol Chem. 2013 Jul 12;288(28):20135-50
All references(37)
Other
accession IDs
MGI:2144062

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory