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Ubap2 Gene Detail
Summary
  • Symbol
    Ubap2
  • Name
    ubiquitin-associated protein 2
  • Synonyms
    1190005K07Rik, mKIAA1491
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916176
    NCBI Gene: 68926
  • Gene Overview
    MyGene.info: UBAP2
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:41194313-41275144 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 21.13 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    241 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916176
protein coding gene Chr4:41194313-41275321 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028157
protein coding gene Chr4:39125422-39210700 (-)
A/J MGP_AJ_G0028115
protein coding gene Chr4:37641646-37723025 (-)
AKR/J MGP_AKRJ_G0028078
protein coding gene Chr4:38605015-38690260 (-)
BALB/cJ MGP_BALBcJ_G0028127
protein coding gene Chr4:37972033-38054256 (-)
C3H/HeJ MGP_C3HHeJ_G0027855
protein coding gene Chr4:39151009-39239428 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028568
protein coding gene Chr4:40571444-40666108 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025909
protein coding gene Chr4:35292563-35375086 (-)
CAST/EiJ MGP_CASTEiJ_G0027311
protein coding gene Chr4:38828464-38914927 (-)
CBA/J MGP_CBAJ_G0027827
protein coding gene Chr4:41963282-42055030 (-)
DBA/2J MGP_DBA2J_G0027971
protein coding gene Chr4:37562027-37643581 (-)
FVB/NJ MGP_FVBNJ_G0027938
protein coding gene Chr4:36895291-36976027 (-)
LP/J MGP_LPJ_G0028079
protein coding gene Chr4:39191279-39276841 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027971
protein coding gene Chr4:45272505-45362378 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028627
protein coding gene Chr4:38727475-38814365 (-)
PWK/PhJ MGP_PWKPhJ_G0027030
protein coding gene Chr4:37575262-37656408 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026857
protein coding gene Chr4:38439997-38529855 (-)
WSB/EiJ MGP_WSBEiJ_G0027387
protein coding gene Chr4:38707043-38790502 (-)



Homology
more
  • Human Ortholog
    UBAP2, ubiquitin associated protein 2
  • Vertebrate Orthologs
    11
  • Human Ortholog
    UBAP2, ubiquitin associated protein 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    UBAP-2
  • Links
    NCBI Gene ID: 55833
    neXtProt AC: NX_Q5T6F2
    UniProt: Q5T6F2

  • Chr Location
    9p13.3; chr9:33921693-34048949 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 73649
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;2 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: UBAP2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028433 Ensembl Gene Model | MGI Sequence Detail 80832 C57BL/6J ±  kb
transcript ENSMUST00000030143 Ensembl | MGI Sequence Detail 4368 Not Applicable  
polypeptide ENSMUSP00000030143 Ensembl | MGI Sequence Detail 1132 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 196
    cDNA 196

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140131, MGI:2140497
References
more
  • Summaries
    All 30
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory