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Ubap2 Gene Detail
Summary
  • Symbol
    Ubap2
  • Name
    ubiquitin-associated protein 2
  • Synonyms
    1190005K07Rik, mKIAA1491
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916176
    NCBI Gene: 68926
  • Gene Overview
    MyGene.info: UBAP2
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:41194313-41275144 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 21.13 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    241 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916176
protein coding gene Chr4:41194313-41275321 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028157
protein coding gene Chr4:39125422-39210700 (-)
A/J MGP_AJ_G0028115
protein coding gene Chr4:37641646-37723025 (-)
AKR/J MGP_AKRJ_G0028078
protein coding gene Chr4:38605015-38690260 (-)
BALB/cJ MGP_BALBcJ_G0028127
protein coding gene Chr4:37972033-38054256 (-)
C3H/HeJ MGP_C3HHeJ_G0027855
protein coding gene Chr4:39151009-39239428 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028568
protein coding gene Chr4:40571444-40666108 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025909
protein coding gene Chr4:35292563-35375086 (-)
CAST/EiJ MGP_CASTEiJ_G0027311
protein coding gene Chr4:38828464-38914927 (-)
CBA/J MGP_CBAJ_G0027827
protein coding gene Chr4:41963282-42055030 (-)
DBA/2J MGP_DBA2J_G0027971
protein coding gene Chr4:37562027-37643581 (-)
FVB/NJ MGP_FVBNJ_G0027938
protein coding gene Chr4:36895291-36976027 (-)
LP/J MGP_LPJ_G0028079
protein coding gene Chr4:39191279-39276841 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027971
protein coding gene Chr4:45272505-45362378 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028627
protein coding gene Chr4:38727475-38814365 (-)
PWK/PhJ MGP_PWKPhJ_G0027030
protein coding gene Chr4:37575262-37656408 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026857
protein coding gene Chr4:38439997-38529855 (-)
WSB/EiJ MGP_WSBEiJ_G0027387
protein coding gene Chr4:38707043-38790502 (-)



Homology
more
  • Human Ortholog
    UBAP2, ubiquitin associated protein 2
  • Vertebrate Orthologs
    11
  • Human Ortholog
    UBAP2, ubiquitin associated protein 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    UBAP-2
  • Links
    NCBI Gene ID: 55833
    neXtProt AC: NX_Q5T6F2
    UniProt: Q5T6F2

  • Chr Location
    9p13.3; chr9:33921693-34048949 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 73649
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;2 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: UBAP2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028433 Ensembl Gene Model | MGI Sequence Detail 80832 C57BL/6J ±  kb
transcript ENSMUST00000030143 Ensembl | MGI Sequence Detail 4368 Not Applicable  
polypeptide ENSMUSP00000030143 Ensembl | MGI Sequence Detail 1132 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 196
    cDNA 196

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140131, MGI:2140497
References
more
  • Summaries
    All 31
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory