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Abhd13 Gene Detail
Summary
  • Symbol
    Abhd13
  • Name
    abhydrolase domain containing 13
  • Synonyms
    1110065L07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916154
    NCBI Gene: 68904
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:9977717-9992155 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 4.53 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    75 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916154
protein coding gene Chr8:9977707-9992155 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033347
protein coding gene Chr8:7114650-7129098 (+)
A/J MGP_AJ_G0033327
protein coding gene Chr8:6871333-6885781 (+)
AKR/J MGP_AKRJ_G0033258
protein coding gene Chr8:7086588-7101036 (+)
BALB/cJ MGP_BALBcJ_G0033328
protein coding gene Chr8:7012561-7027009 (+)
C3H/HeJ MGP_C3HHeJ_G0033041
protein coding gene Chr8:7245803-7260251 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033840
protein coding gene Chr8:7421336-7435784 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030810
protein coding gene Chr8:6421034-6435693 (+)
CAST/EiJ MGP_CASTEiJ_G0032363
protein coding gene Chr8:6920898-6935351 (+)
CBA/J MGP_CBAJ_G0033014
protein coding gene Chr8:7727540-7741988 (+)
DBA/2J MGP_DBA2J_G0033167
protein coding gene Chr8:6870939-6885387 (+)
FVB/NJ MGP_FVBNJ_G0033116
protein coding gene Chr8:6819838-6834286 (+)
LP/J MGP_LPJ_G0033261
protein coding gene Chr8:7032198-7046646 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033150
protein coding gene Chr8:8089849-8104297 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033857
protein coding gene Chr8:7083214-7097662 (+)
PWK/PhJ MGP_PWKPhJ_G0032076
protein coding gene Chr8:6827540-6842104 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031918
protein coding gene Chr8:6993978-7008419 (+)
WSB/EiJ MGP_WSBEiJ_G0032479
protein coding gene Chr8:7127789-7144481 (+)



Homology
more
  • Human Ortholog
    ABHD13, abhydrolase domain containing 13
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ABHD13, abhydrolase domain containing 13
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA153I24.2, BEM46L1, C13orf6
  • Links
    NCBI Gene ID: 84945
    neXtProt AC: NX_Q7L211
    UniProt: Q7L211

  • Chr Location
    13q33.3; chr13:108218415-108235440 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68904 NCBI Gene Model | MGI Sequence Detail 14439 C57BL/6J ±  kb
transcript NM_026868 RefSeq | MGI Sequence Detail 5181 C57BL/6  
polypeptide Q80UX8 UniProt | EBI | MGI Sequence Detail 337 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 12
    Primer pair 1

    Microarray probesets 8
Other
Accession IDs
less
MGI:2142563, MGI:2142616
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:248443 Yokoi N, et al., Identification of PSD-95 Depalmitoylating Enzymes. J Neurosci. 2016 Jun 15;36(24):6431-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/22/2019
MGI 6.14
The Jackson Laboratory