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Klhdc9 Gene Detail
Summary
  • Symbol
    Klhdc9
  • Name
    kelch domain containing 9
  • Synonyms
    1190002J23Rik, ESTM31
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916124
    NCBI Gene: 68874
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:171358449-171360798 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 79.36 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916124
protein coding gene Chr1:171358446-171360798 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016758
protein coding gene Chr1:177154493-177156836 (-)
A/J MGP_AJ_G0016738
protein coding gene Chr1:169934783-169937131 (-)
AKR/J MGP_AKRJ_G0016704
protein coding gene Chr1:175029856-175032208 (-)
BALB/cJ MGP_BALBcJ_G0016699
protein coding gene Chr1:170429118-170431461 (-)
C3H/HeJ MGP_C3HHeJ_G0016522
protein coding gene Chr1:175274098-175276441 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017160
protein coding gene Chr1:183043964-183046316 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014868
protein coding gene Chr1:161621363-161623704 (-)
CAST/EiJ MGP_CASTEiJ_G0016103
protein coding gene Chr1:174905362-174907715 (-)
CBA/J MGP_CBAJ_G0016497
protein coding gene Chr1:189554331-189556674 (-)
DBA/2J MGP_DBA2J_G0016604
protein coding gene Chr1:168777284-168779627 (-)
FVB/NJ MGP_FVBNJ_G0016600
protein coding gene Chr1:167126171-167128514 (-)
LP/J MGP_LPJ_G0016675
protein coding gene Chr1:178268354-178270697 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016627
protein coding gene Chr1:196832135-196834483 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017197
protein coding gene Chr1:174898662-174901010 (-)
PWK/PhJ MGP_PWKPhJ_G0015889
protein coding gene Chr1:168000259-168002607 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015673
protein coding gene Chr1:173684857-173687181 (-)
WSB/EiJ MGP_WSBEiJ_G0016165
protein coding gene Chr1:175015693-175018041 (-)



Homology
more
  • Human Ortholog
    KLHDC9, kelch domain containing 9
  • Vertebrate Orthologs
    8
  • Human Ortholog
    KLHDC9, kelch domain containing 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KARCA1
  • Links
    NCBI Gene ID: 126823
    neXtProt AC: NX_Q8NEP7
    UniProt: Q8NEP7

  • Chr Location
    1q23.3; chr1:161098361-161100348 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68874 NCBI Gene Model | MGI Sequence Detail 2350 C57BL/6J ±  kb
transcript NM_001033039 RefSeq | MGI Sequence Detail 1555 C57BL/6  
polypeptide Q3USL1 UniProt | EBI | MGI Sequence Detail 350 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    Genomic 1
    cDNA 8
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1334467
References
more
  • Summaries
    All 28
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:52606 Eddleston J, et al., Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp). Genomics. 1999 Mar 1;56(2):149-59
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory