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Imp3 Gene Detail
Summary
  • Symbol
    Imp3
  • Name
    IMP3, U3 small nucleolar ribonucleoprotein
  • Synonyms
    1190002L16Rik, Imp3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916119
    NCBI Gene: 102462
  • Gene Overview
    MyGene.info: IMP3
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:56937500-56938398 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 30.53 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916119
protein coding gene Chr9:56937475-56938398 (.)
129S1/SvImJ MGP_129S1SvImJ_G0034855
protein coding gene Chr9:56096145-56097068 (+)
A/J MGP_AJ_G0034836
protein coding gene Chr9:54291687-54292610 (+)
AKR/J MGP_AKRJ_G0034765
protein coding gene Chr9:55551196-55552119 (+)
BALB/cJ MGP_BALBcJ_G0034828
protein coding gene Chr9:54089175-54090098 (+)
C3H/HeJ MGP_C3HHeJ_G0034538
protein coding gene Chr9:56011077-56012000 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035347
protein coding gene Chr9:57673000-57673923 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032258
protein coding gene Chr9:53628478-53629402 (+)
CAST/EiJ MGP_CASTEiJ_G0033859
protein coding gene Chr9:56085327-56087167 (+)
CBA/J MGP_CBAJ_G0034509
protein coding gene Chr9:59662468-59663391 (+)
DBA/2J MGP_DBA2J_G0034668
protein coding gene Chr9:54175162-54176085 (+)
FVB/NJ MGP_FVBNJ_G0034610
protein coding gene Chr9:53396158-53397081 (+)
LP/J MGP_LPJ_G0034751
protein coding gene Chr9:56383919-56384842 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034653
protein coding gene Chr9:61158044-61158967 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035369
protein coding gene Chr9:55550597-55551520 (+)
PWK/PhJ MGP_PWKPhJ_G0033564
protein coding gene Chr9:54199410-54200463 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033398
protein coding gene Chr9:55832032-55832955 (+)
WSB/EiJ MGP_WSBEiJ_G0033972
protein coding gene Chr9:55490538-55491461 (+)



Homology
more
  • Human Ortholog
    IMP3, IMP3, U3 small nucleolar ribonucleoprotein
  • Vertebrate Orthologs
    9
  • Human Ortholog
    IMP3, IMP3, U3 small nucleolar ribonucleoprotein
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BRMS2, C15orf12, MRPS4
  • Links
    NCBI Gene ID: 55272
    neXtProt AC: NX_Q9NV31
    UniProt: Q9NV31

  • Chr Location
    15q24.2; chr15:75639085-75640323 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 6120
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: IMP3
  • Gene Tree
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 102462 NCBI Gene Model | MGI Sequence Detail 899 C57BL/6J ±  kb
transcript NM_133976 RefSeq | MGI Sequence Detail 915 FVB/N  
polypeptide Q921Y2 UniProt | EBI | MGI Sequence Detail 184 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 146
    cDNA 146

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142999
References
more
  • Summaries
    All 26
    Gene Ontology 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory