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Rnf122 Gene Detail
Summary
  • Symbol
    Rnf122
  • Name
    ring finger protein 122
  • Synonyms
    1110063C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916117
    NCBI Gene: 68867
  • Gene Overview
    MyGene.info: RNF122
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:31111820-31131482 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 17.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    356 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916117
protein coding gene Chr8:31111670-31132071 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033513
protein coding gene Chr8:29492301-29513006 (+)
A/J MGP_AJ_G0033493
protein coding gene Chr8:28335943-28355960 (+)
AKR/J MGP_AKRJ_G0033417
protein coding gene Chr8:29264154-29284127 (+)
BALB/cJ MGP_BALBcJ_G0033489
protein coding gene Chr8:28482998-28505459 (+)
C3H/HeJ MGP_C3HHeJ_G0033203
protein coding gene Chr8:29561428-29583249 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034005
protein coding gene Chr8:30568502-30589159 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030955
protein coding gene Chr8:25220610-25240607 (+)
CAST/EiJ MGP_CASTEiJ_G0032528
protein coding gene Chr8:28943693-28965119 (+)
CBA/J MGP_CBAJ_G0033179
protein coding gene Chr8:31807708-31829986 (+)
DBA/2J MGP_DBA2J_G0033332
protein coding gene Chr8:28335863-28355800 (+)
FVB/NJ MGP_FVBNJ_G0033277
protein coding gene Chr8:28055309-28075907 (+)
LP/J MGP_LPJ_G0033422
protein coding gene Chr8:29440979-29463100 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033319
protein coding gene Chr8:31392077-31412853 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034024
protein coding gene Chr8:29273365-29300468 (+)
PWK/PhJ MGP_PWKPhJ_G0032240
protein coding gene Chr8:27849809-27871774 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032073
protein coding gene Chr8:28620404-28640442 (+)
WSB/EiJ MGP_WSBEiJ_G0032644
protein coding gene Chr8:29444947-29469348 (+)



Homology
more
  • Human Ortholog
    RNF122, ring finger protein 122
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RNF122, ring finger protein 122
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79845
    neXtProt AC: NX_Q9H9V4
    UniProt: Q9H9V4

  • Chr Location
    8p12; chr8:33547754-33567128 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039328 Ensembl Gene Model | MGI Sequence Detail 19663 C57BL/6J ±  kb
transcript ENSMUST00000217278 Ensembl | MGI Sequence Detail 1726 Not Applicable  
polypeptide ENSMUSP00000150893 Ensembl | MGI Sequence Detail 155 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR013083 Zinc finger, RING/FYVE/PHD-type
    IPR001841 Zinc finger, RING-type
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory