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Lrrn4cl Gene Detail
Summary
  • Symbol
    Lrrn4cl
  • Name
    LRRN4 C-terminal like
  • Synonyms
    1110067I12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916102
    NCBI Gene: 68852
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8850768-8853909 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 5.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916102
protein coding gene Chr19:8850768-8853909 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024815
protein coding gene Chr19:6133723-6136847 (+)
A/J MGP_AJ_G0024783
protein coding gene Chr19:5803243-5806367 (+)
AKR/J MGP_AKRJ_G0024758
protein coding gene Chr19:5898304-5901428 (+)
BALB/cJ MGP_BALBcJ_G0024783
protein coding gene Chr19:5908377-5911501 (+)
C3H/HeJ MGP_C3HHeJ_G0024549
protein coding gene Chr19:5981581-5984705 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025230
protein coding gene Chr19:6262691-6265815 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022659
protein coding gene Chr19:6051830-6055216 (+)
CAST/EiJ MGP_CASTEiJ_G0024022
protein coding gene Chr19:5626571-5630388 (+)
CBA/J MGP_CBAJ_G0024523
protein coding gene Chr19:6372557-6375681 (+)
DBA/2J MGP_DBA2J_G0024650
protein coding gene Chr19:5635784-5638908 (+)
FVB/NJ MGP_FVBNJ_G0024617
protein coding gene Chr19:5708295-5711419 (+)
LP/J MGP_LPJ_G0024737
protein coding gene Chr19:6023012-6026136 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024644
protein coding gene Chr19:6238546-6241670 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025279
protein coding gene Chr19:5938327-5941451 (+)
PWK/PhJ MGP_PWKPhJ_G0023767
protein coding gene Chr19:5304572-5307745 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023572
protein coding gene Chr19:5549921-5553374 (+)
WSB/EiJ MGP_WSBEiJ_G0024084
protein coding gene Chr19:5908281-5911405 (+)



Homology
more
  • Human Ortholog
    LRRN4CL, LRRN4 C-terminal like
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LRRN4CL, LRRN4 C-terminal like
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 221091
    neXtProt AC: NX_Q8ND94
    UniProt: Q8ND94

  • Chr Location
    11q12.3; chr11:62686402-62689899 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68852 NCBI Gene Model | MGI Sequence Detail 3142 C57BL/6J ±  kb
transcript NM_001013019 RefSeq | MGI Sequence Detail 2600 C57BL/6  
polypeptide Q3TYX2 UniProt | EBI | MGI Sequence Detail 239 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/16/2021
MGI 6.16
The Jackson Laboratory