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Tulp4 Gene Detail
Summary
  • Symbol
    Tulp4
  • Name
    tubby like protein 4
  • Synonyms
    1110057P05Rik, 2210038L17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916092
    NCBI Gene: 68842
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:6106828-6240637 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 3.72 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    417 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916092
protein coding gene Chr17:6106437-6251128 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023111
protein coding gene Chr17:3270100-3416684 (+)
A/J MGP_AJ_G0023081
protein coding gene Chr17:3192446-3321026 (+)
AKR/J MGP_AKRJ_G0023047
protein coding gene Chr17:3269933-3422871 (+)
BALB/cJ MGP_BALBcJ_G0023084
protein coding gene Chr17:3162697-3299061 (+)
C3H/HeJ MGP_C3HHeJ_G0022844
protein coding gene Chr17:3304057-3454264 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021029
protein coding gene Chr17:2972381-3111974 (+)
CAST/EiJ MGP_CASTEiJ_G0022362
protein coding gene Chr17:3316676-3563574 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0023014
protein coding gene Chr17:3412569-3538549 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022940
protein coding gene Chr17:3425782-3569031 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023548
protein coding gene Chr17:3303767-3476255 (+)
PWK/PhJ MGP_PWKPhJ_G0022106
protein coding gene Chr17:3122300-3526450 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021934
protein coding gene Chr17:3230813-3377944 (+)
WSB/EiJ MGP_WSBEiJ_G0022412
protein coding gene Chr17:3264857-3909782 (+)



Homology
more
  • Human Ortholog
    TULP4, tubby like protein 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TULP4, tubby like protein 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TUSP
  • Links
    NCBI Gene ID: 56995
    neXtProt AC: NX_Q9NRJ4
    UniProt: Q9NRJ4

  • Chr Location
    6q25.3; chr6:158232192-158511828 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68842 NCBI Gene Model | MGI Sequence Detail 133810 C57BL/6J ±  kb
transcript NM_054040 RefSeq | MGI Sequence Detail 9714 C57BL/6  
polypeptide Q9JIL5 UniProt | EBI | MGI Sequence Detail 1547 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    cDNA 26
    Primer pair 1
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1925896
References
more
  • Summaries
    All 35
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 11
  • Earliest
    J:36910 You Y, et al., Chromosomal deletion complexes in mice by radiation of embryonic stem cells. Nat Genet. 1997 Mar;15(3):285-8
  • Latest
    J:231595 Gurdziel K, et al., Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene, cJun. Dev Dyn. 2016 May;245(5):614-26

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory