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Foxk2
Gene Detail
 Symbol
Name
ID
Foxk2
forkhead box K2
MGI:1916087
Synonyms 1110054H05Rik, 5730434B08Rik, Ilf1
Feature Type protein coding gene
Genetic Map
Chromosome 11
85.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:121259990-121309896 bp, + strand
From VEGA annotation of GRCm38

  49907 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18748  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Foxk2

Human
homologs
Human Homolog FOXK2, forkhead box K2
NCBI Gene ID 3607
neXtProt AC  NX_Q01167
Human Synonyms  ILF, ILF1, ILF-1
Human Chr (Location)  17q25; chr17:82519718-82604607 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(7)
Incidental mutations (data from APF )
Interactions
Foxk2 interacts with 336 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (19 annotations)
Process embryo development, pattern specification process, ...
Component intracellular membrane-bounded organelle, nucleus
Function DNA binding, DNA binding, bending, ...
External Resources: FuncBase
Expression
Literature Summary: (8 records)
Data Summary: Results (230)    Tissues (162)    Images (14)
Theiler Stages: 5, 17, 18, 20, 21, 22, 23, 27, 28
Assay TypeResults
RNA in situ 228
RT-PCR 2
cDNA source data(145)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(149) Genomic(1) cDNA(146) Primer pair(1) Other(1)
Microarray probesets(9)
Other database
links
VEGA Gene ModelOTTMUSG00000004287 (Evidence)
Ensembl Gene ModelENSMUSG00000039275 (Evidence)
Entrez Gene68837 (Evidence)
UniGene209750
DFCITC1600448, TC1600612, TC1602338, TC1604564
DoTSDT.101235961, DT.101388058, DT.491076, DT.87056064
NIA Mouse Gene IndexU013686
Consensus CDS ProjectCCDS36393.2
International Mouse Knockout Project StatusFoxk2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004287 VEGA Gene Model | MGI Sequence Detail 49907 C57BL/6J ±  kb
transcript OTTMUST00000009717 VEGA | MGI Sequence Detail 5029 Not Applicable 
polypeptide OTTMUSP00000004677 VEGA | MGI Sequence Detail 651 Not Applicable 

For the selected sequences
All sequences(52) RefSeq(10) UniProt(2)
Polymorphisms SNPs within 2kb(202 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000253 Forkhead-associated (FHA) domain
InterPro IPR008984 SMAD/FHA domain
InterPro IPR001766 Transcription factor, fork head
InterPro IPR018122 Transcription factor, fork head, conserved site
InterPro IPR011991 Winged helix-turn-helix DNA-binding domain
Protein Ontology PR:000007632 forkhead box protein K2
References (Earliest) J:39656 Farrington SM, et al., Winged-helix, Hedgehog and Bmp genes are differentially expressed in distinct cell layers of the murine yolk sac. Mech Dev. 1997 Mar;62(2):197-211
(Latest) J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
All references(37)
Other
accession IDs
MGI:1913885, MGI:891988

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory