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1110046J04Rik Gene Detail
Summary
  • Symbol
    1110046J04Rik
  • Name
    RIKEN cDNA 1110046J04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916058
    NCBI Gene: 68808
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:33936032-33960181 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 14.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    138 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916058
lncRNA gene Chr13:33935567-33960181 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003181
antisense lncRNA gene Chr13:32038882-32061320 (+)
A/J MGP_AJ_G0003155
antisense lncRNA gene Chr13:31098363-31121038 (+)
AKR/J MGP_AKRJ_G0003137
antisense lncRNA gene Chr13:31825163-31851128 (+)
BALB/cJ MGP_BALBcJ_G0003143
antisense lncRNA gene Chr13:31175389-31197789 (+)
C3H/HeJ MGP_C3HHeJ_G0003099
antisense lncRNA gene Chr13:31756506-31785164 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003287
antisense lncRNA gene Chr13:33092300-33127982 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002815
antisense lncRNA gene Chr13:29415136-29435359 (+)
CAST/EiJ MGP_CASTEiJ_G0003067
antisense lncRNA gene Chr13:31420216-31460839 (+)
CBA/J MGP_CBAJ_G0003095
antisense lncRNA gene Chr13:34543737-34571561 (+)
DBA/2J MGP_DBA2J_G0003101
antisense lncRNA gene Chr13:30622045-30645313 (+)
FVB/NJ MGP_FVBNJ_G0003120
antisense lncRNA gene Chr13:30200817-30225425 (+)
LP/J MGP_LPJ_G0003176
antisense lncRNA gene Chr13:32263046-32288361 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003109
antisense lncRNA gene Chr13:34757104-34790957 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003287
antisense lncRNA gene Chr13:31482304-31508809 (+)
PWK/PhJ MGP_PWKPhJ_G0003025
antisense lncRNA gene Chr13:30737623-30762413 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002970
antisense lncRNA gene Chr13:30141740-30166838 (+)
WSB/EiJ MGP_WSBEiJ_G0003099
antisense lncRNA gene Chr13:31842902-31871081 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1110046J04Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68808 NCBI Gene Model | MGI Sequence Detail 24150 C57BL/6J ±  kb
transcript NR_040707 RefSeq | MGI Sequence Detail 777 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory