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Rab3gap2
Gene Detail
Symbol

Name
ID
Rab3gap2
RAB3 GTPase activating protein subunit 2
MGI:1916043
Synonyms
1110059F07Rik, mKIAA0839
Feature Type
protein coding gene
Genetic Map
Chromosome 1
89.45 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:185204117-185286759 bp, + strand
From VEGA annotation of GRCm38

  82643 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40842  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RAB3GAP2
Gene Tree: Rab3gap2

Human
homologs
RAB3GAP2, RAB3 GTPase activating protein subunit 2 (non-catalytic)
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 25782
neXtProt AC: NX_Q9H2M9

Human Synonyms: p150, RAB3GAP150, RAB3-GAP150, SPG69, WARBM2

Human Chr (Location): 1q41; chr1:220148268-220272501 (-)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human RAB3GAP2

Mutations,
alleles, and
phenotypes
All mutations/alleles(36) : Gene trapped(34) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Rab3gap2 interacts with 370 markers (Mir1b, Mir7-1, Mir7-2, ...)
Expression
cDNA source data(12)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rab3gap2    NEW 
Molecular
reagents
All nucleic(12) cDNA(12)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000050654 (Evidence)
Ensembl Gene Model ENSMUSG00000039318 (Evidence)
Entrez Gene 98732 (Evidence)
Consensus CDS Project CCDS48478.1
International Mouse Phenotyping Consortium Status Rab3gap2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000050654 VEGA Gene Model | MGI Sequence Detail 82643 C57BL/6J ±  kb
transcript OTTMUST00000128410 VEGA | MGI Sequence Detail 7052 Not Applicable 
polypeptide OTTMUSP00000069079 VEGA | MGI Sequence Detail 1387 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(5) UniProt(6)
Polymorphisms
SNPs within 2kb(1013 from dbSNP Build 137)    SNPs within 2kb including multiple locations(1019)
Protein-related
information
ResourceIDDescription
InterPro IPR026059 Rab3-GAP regulatory subunit
Protein Ontology PR:000013622 rab3 GTPase-activating protein non-catalytic subunit
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:2138353, MGI:2138627

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory