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Rab3gap2 Gene Detail
Summary
  • Symbol
    Rab3gap2
  • Name
    RAB3 GTPase activating protein subunit 2
  • Synonyms
    1110059F07Rik, mKIAA0839
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916043
    NCBI Gene: 98732
  • Gene Overview
    MyGene.info: RAB3GAP2
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:185204117-185286759 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 89.45 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    993 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916043
protein coding gene Chr1:185204087-185286759 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016913
protein coding gene Chr1:191917186-192005873 (+)
A/J MGP_AJ_G0016892
protein coding gene Chr1:184076207-184162392 (+)
AKR/J MGP_AKRJ_G0016857
protein coding gene Chr1:189499207-189581626 (+)
BALB/cJ MGP_BALBcJ_G0016850
protein coding gene Chr1:184715958-184793325 (+)
C3H/HeJ MGP_C3HHeJ_G0016674
protein coding gene Chr1:190358450-190452537 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017313
protein coding gene Chr1:198045312-198141889 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015020
protein coding gene Chr1:175067974-175146182 (+)
CAST/EiJ MGP_CASTEiJ_G0016257
protein coding gene Chr1:189788810-189880706 (+)
CBA/J MGP_CBAJ_G0016648
protein coding gene Chr1:205423655-205533757 (+)
DBA/2J MGP_DBA2J_G0016754
protein coding gene Chr1:182838639-182923982 (+)
FVB/NJ MGP_FVBNJ_G0016750
protein coding gene Chr1:180933243-181019361 (+)
LP/J MGP_LPJ_G0016829
protein coding gene Chr1:193072133-193162330 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016782
protein coding gene Chr1:212317217-212409847 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017350
protein coding gene Chr1:189378009-189461435 (+)
PWK/PhJ MGP_PWKPhJ_G0016044
protein coding gene Chr1:182040641-182127906 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015820
protein coding gene Chr1:188331073-188416734 (+)
WSB/EiJ MGP_WSBEiJ_G0016319
protein coding gene Chr1:189541276-189628554 (+)



Homology
more
  • Human Ortholog
    RAB3GAP2, RAB3 GTPase activating non-catalytic protein subunit 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB3GAP2, RAB3 GTPase activating non-catalytic protein subunit 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    p150, RAB3GAP150, RAB3-GAP150, SPG69, WARBM2
  • Links
    NCBI Gene ID: 25782
    neXtProt AC: NX_Q9H2M9
    UniProt: Q9H2M9

  • Chr Location
    1q41; chr1:220148268-220272501 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human RAB3GAP2 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039318 Ensembl Gene Model | MGI Sequence Detail 82643 C57BL/6J ±  kb
transcript ENSMUST00000069652 Ensembl | MGI Sequence Detail 7052 Not Applicable  
polypeptide ENSMUSP00000066325 Ensembl | MGI Sequence Detail 1387 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    6 Sequences
  • InterPro Domains
    IPR026059 Rab3-GAP regulatory subunit
    IPR029257 Rab3GAP regulatory subunit, C-terminal
    IPR032839 Rab3-GAP regulatory subunit, N-terminal
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
Other
Accession IDs
less
MGI:2138353, MGI:2138627
References
more
  • Summaries
    All 33
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory