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Rab3gap2
Gene Detail
 Symbol
Name
ID
Rab3gap2
RAB3 GTPase activating protein subunit 2
MGI:1916043
Synonyms 1110059F07Rik, mKIAA0839
Feature Type protein coding gene
Genetic Map
Chromosome 1
89.45 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:185204168-185286743 bp, + strand
From Ensembl annotation of GRCm38

  82576 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40842  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Rab3gap2

Human
homologs
Human Homolog RAB3GAP2, RAB3 GTPase activating protein subunit 2 (non-catalytic)
NCBI Gene ID 25782
neXtProt AC  NX_Q9H2M9
Human Synonyms  p150, RAB3GAP150, RAB3-GAP150, SPG69, WARBM2
Human Chr (Location)  1q41; chr1:220148268-220272501 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human RAB3GAP2
Mutations,
alleles, and
phenotypes
All mutations/alleles(35) : Gene trapped(34) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rab3gap2 interacts with 371 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process establishment of protein localization to endoplasmic reticulum membrane, positive regulation of endoplasmic reticulum tubular network organization, ...
Component cytoplasm, plasma membrane, ...
Function enzyme regulator activity, GTPase activator activity, ...
External Resources: FuncBase
Expression
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) cDNA(12)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000039318 (Evidence)
Entrez Gene98732 (Evidence)
Consensus CDS ProjectCCDS48478.1
International Mouse Knockout Project StatusRab3gap2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039318 Ensembl Gene Model | MGI Sequence Detail 82576 C57BL/6J ±  kb
transcript ENSMUST00000069652 Ensembl | MGI Sequence Detail 6985 Not Applicable 
polypeptide ENSMUSP00000066325 Ensembl | MGI Sequence Detail 1387 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(5) UniProt(5)
Polymorphisms SNPs within 2kb(1011 from dbSNP Build 137)    SNPs within 2kb including multiple locations(1017)
Protein-related
information
ResourceIDDescription
InterPro IPR026059 Rab3-GAP regulatory subunit
Protein Ontology PR:000013622 rab3 GTPase-activating protein non-catalytic subunit
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:2138353, MGI:2138627

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory